| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4982 |
|---|
| Symbol | |
|---|
| ID | 8228588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6026766 |
|---|
| End bp | 6027188 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644932830 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003089347 |
|---|
| Protein GI | 255038726 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5378] Predicted nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.601891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG TGGTGGATAC CAATATTGTT TTTAGCGGGA TATTGAATTC GACCAGTCGC
ATCGGTAATT TCCTCGTTAA CCCTCCTAAA AATGTTCGCG AGTTTCTTCG CGCAGAAATT
TCCAAGCACA ACGCAAAATT ACTGCATCTA ACCCGACTTC CCGAGGAGGA GCTGGAAGAG
CTGGAACGCC TCGTAACCAG TAAGATCACG TTCTTCAACG AGGCGGTGAT ACCAATCCAA
AAACTAATTG ATGCCGAGCG TCTGCTCATT GATGTCGATC CTAATGACAC CCCGTTTGTA
GCACTAGCGC TTGCATTCGA TGCAATTCTA TGGACGGGTG ACAAAGTTTT GATAGAAGGT
TTGAGAAGAA TGGGTTTTGA GCAAATCATC ACCACGGCAG AACTCGCCGG TCTGCTTGAA
TAA
|
|---|
| Protein sequence | MKLVVDTNIV FSGILNSTSR IGNFLVNPPK NVREFLRAEI SKHNAKLLHL TRLPEEELEE
LERLVTSKIT FFNEAVIPIQ KLIDAERLLI DVDPNDTPFV ALALAFDAIL WTGDKVLIEG
LRRMGFEQII TTAELAGLLE
|
|---|
| |