| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4977 |
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| Symbol | |
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| ID | 8228583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6017535 |
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| End bp | 6020630 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932825 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089342 |
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| Protein GI | 255038721 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000497416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.504247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAG CTTTACAGTG TGTGCTGCTC ACATTTCTGT GGGTAGTACT ATTTGTTAAC
ACATCGCACG CCCAGGACAG GCAGGTCACC GGGAAAGTGA ACGATGAGAA TGGTGCCGGG
CTCCCCGGGG CCAATGTCCT GATCAAAGGG ACCACGAGGG GAACAAACAC GGATGCGGAG
GGGAATTTTA CATTGAATAT GAATGGCGCT GCCACACTGA TCATTTCGTC GGTGGGCTAC
ACATCCAAGG AAGTGGAAGT ATCGGCGAAT ATGACCAATG TGACGGTCGG AATGGATGCC
GATGTCCGTA ACCTGGGCGA GGTGGTCGTT ACCGCGCTGG GTATCACCAA AGATCAGAAA
ACGCTGAGCT ACGCCACCCA GATGATCAAT ACCGACAATT TTGCAAAAGC ACGCGAACTG
AACGTGGCGA ACTCGCTCTC CGGGCGTGTG GCGGGACTGG ATATTGTCCG CTCATCGTCG
GGTGTGGGTG GTTCGAGCAG GGTGGTGCTT CGGGGAGACC GGTCCATTAC CACCAATAAC
CAGGCCTTGA TTGTCGTGGA CGGGGTGCCT ATTGATAATA CAAACTTTAC ACCGGCAAAC
GCGAACGGAG GACGCGAAGG TAGTGACGCC CTTTCCAGCA TTAACCCGGA TGATATCGAG
TCCATCAACG TCCTGAGAGG CGCATCTGCC ACAGCGCTTT ACGGCAGCCG CGCAGCCAAC
GGCGCTTTGC TTATTACGAC AAAAAAGGGA GCGGTTCGAA AGGGAATCGG TGTTAGCATC
AACAGTACAT TTCAGGCCGA GCGTGCTATG GTTCTCCAAA ATTTCCAAAA CGTATATGGA
CAAGGTGTAG ACGGCGATAA AATTCAACCC AACAGCGAGT TCAGCTGGGG ACCGAAAATG
GAAGGACAGC AAGTGACCGC ATGGGGACCT GATCCAGCCA ATAAGGGCAA AACCTATGCT
TATTCTCCCA ATCCCGATTC CTACAAGGAC TTTTACTCGA CCGGAACTTC CATTGCGAAT
TCGGCATCGC TGACTGCGGG AAATGAGAAG GTGCAAACCT ATTTCTCTTA TACCAACACA
GCTGCCAAAG GCATTGTATC GAACAATAAG CTGGGCCGTC ACAATTTTAA CCTTCGTCTC
ACAAGCCAGA TTACCAGCAA ACTGAGCTTT GACGGAAAGG TGACCTATCT GAACGAAAAA
GTGGATAACA GGCAGCAAAC GGGCGAGGCG TTCGCGAATT TACAGCGACA CATTCTCCGC
CTGCCGAGAA GCATTTCACT CGAACAGGCC AAAGACTTTG AATACATTGA TCCGGCCACG
GGTAAGTTGC TTCAAAATTA TTGGAACCCG GGTTCCAACG GAGGCCAAAA CCCCTACTGG
ATCAAGAACC GGGTGATCGC ATTGAATACC AGGGATCGTA TTTATGGTTT TACGCAACTG
AACTACAAGC TTACAAACTG GTTCACCTTG ATGGGGCGGG CGGGCTACGA CAAGTACATC
GATAAGTTTG AAGGAAAATG GTACACCAAC ACCTACACGA TCGCCGACTT CGGCGACTAT
CAGACCCAGT GGCGGGACAA TTCAGAATTA AACCTCGACC TGTTTGGGCT TATCAGTAAA
CAATTCGGGG GAGATTTCCG GGTTGAAGGT ACCATTGGAG GCAATATCCT GAAAAGGGAT
TTTATCAACC ATGAGACACT CAACAATCAG CTGAATCGCG ATAACCTTTT TGTGACGACC
AATGCCAGGA ATTCAGTAAC GAACCGTACT GTCACGCAGA CCCGTAAGCA GGGTATCTTC
GCATCTGCTG ATTTCATCTG GCGGGATGCG TTAACTATCT CGGCGTCGGC ACGGAACGAC
TGGTCTTCGA CGCTACCGAA GGAAAATCAG TCCTATTTCT TTCCTTCGGT GGGCGCCGCC
GCGGTTCTGA CAAGCCTTTT CAATTTGCCG CAGGGGATTT CCTTTGCCAA AATTCGCGGA
AGTTATGCAC TCACGGGTAA TGACGCCGAG CCCTATTTGC TCGCTCAAAC CTATTCCTAC
ATAGCAGGTG GCAATACGGG TTACATCGTT CGCGACGCGA CCAAGCCGTT TCCAGGATTG
AAACCGGAAT TAACCACGGC GCAAGAAGTA GGTTTGGAAG CGAAGTTTCT CAACAACCGG
ATTGGTTTTG ATCTGACACT CTATAATAGC AACTCCAAAA ACCAGTTGTT CAGGGTCAAC
CTTTCGCCGG CTTCGGGTTG GAGCAATGAA TATATCAATG CGGGAAATGT GCGTAACCGT
GGAATCGAGC TAACATTGAA CCTCGTGCCC GTGAGGACCG AGAATTTCAG CTGGAATTTT
GACCTTAATT ATTCAAGAAA CGAAAACGAA GTACTGAAAC TGTCGGACAG GCTGGCTACG
CTCACGATTG CAAGTGACTT CATGAACTTC GTCCGCGCGG AAGAAGGCAA GCCGCTCGGT
CAGATTTACA GCCGCGGGTT TCAGCGTGAC GCGCAGGGAA GGGTTCTGGT CGGCACGAAC
GGCTTGCCGC TTGTGACGTC CGGTACCGAC GTGCCGCTTG GCACGTCTCG TCCGACATGG
ACAGGGGGCA TTACCAACCG GCTATCTTAT AAAGGAGTCA ATTTCAGCTT CCTTGTAAGC
GGCAGGATCG GAGGAGTCGT TACTTCGTTC ACCAATGCGG TTATTTATGC CGATGGCGTT
ACGGAAGAAA CGCTGGAAGG TCGGGCAGGC ATGGTTGTGC CGGGCGTTCA GGCCGATGGG
AGCGTGAATA CCGTACAGAC CACTGCCGAG AAATACTGGA AATTCGTAGG TGGCCGGAAT
ACGCCGATTG GCGAGGCATT TACTTACAGT GCATCGAACA TCCGGATGCG GGAAATGACC
TTGGGCTATA CTATTCCGCA AAGTGTGATC GGCAAGTCGC CATTCCAGAA CATCTCTTTA
TCTCTGGTGG GGCGCAACTT GTTCTTCATT ATGAACAAAG CGAAAGGTTT CGATCCTGAA
CTTGTGGCTG GTTCGGCCAA TACCACGGTG GGGCTGGAGT CATTCTCGCT TCCGCCTACT
CGTTCGATCG GTGTTAACCT TAACCTATCA TTCTAA
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| Protein sequence | MRKALQCVLL TFLWVVLFVN TSHAQDRQVT GKVNDENGAG LPGANVLIKG TTRGTNTDAE
GNFTLNMNGA ATLIISSVGY TSKEVEVSAN MTNVTVGMDA DVRNLGEVVV TALGITKDQK
TLSYATQMIN TDNFAKAREL NVANSLSGRV AGLDIVRSSS GVGGSSRVVL RGDRSITTNN
QALIVVDGVP IDNTNFTPAN ANGGREGSDA LSSINPDDIE SINVLRGASA TALYGSRAAN
GALLITTKKG AVRKGIGVSI NSTFQAERAM VLQNFQNVYG QGVDGDKIQP NSEFSWGPKM
EGQQVTAWGP DPANKGKTYA YSPNPDSYKD FYSTGTSIAN SASLTAGNEK VQTYFSYTNT
AAKGIVSNNK LGRHNFNLRL TSQITSKLSF DGKVTYLNEK VDNRQQTGEA FANLQRHILR
LPRSISLEQA KDFEYIDPAT GKLLQNYWNP GSNGGQNPYW IKNRVIALNT RDRIYGFTQL
NYKLTNWFTL MGRAGYDKYI DKFEGKWYTN TYTIADFGDY QTQWRDNSEL NLDLFGLISK
QFGGDFRVEG TIGGNILKRD FINHETLNNQ LNRDNLFVTT NARNSVTNRT VTQTRKQGIF
ASADFIWRDA LTISASARND WSSTLPKENQ SYFFPSVGAA AVLTSLFNLP QGISFAKIRG
SYALTGNDAE PYLLAQTYSY IAGGNTGYIV RDATKPFPGL KPELTTAQEV GLEAKFLNNR
IGFDLTLYNS NSKNQLFRVN LSPASGWSNE YINAGNVRNR GIELTLNLVP VRTENFSWNF
DLNYSRNENE VLKLSDRLAT LTIASDFMNF VRAEEGKPLG QIYSRGFQRD AQGRVLVGTN
GLPLVTSGTD VPLGTSRPTW TGGITNRLSY KGVNFSFLVS GRIGGVVTSF TNAVIYADGV
TEETLEGRAG MVVPGVQADG SVNTVQTTAE KYWKFVGGRN TPIGEAFTYS ASNIRMREMT
LGYTIPQSVI GKSPFQNISL SLVGRNLFFI MNKAKGFDPE LVAGSANTTV GLESFSLPPT
RSIGVNLNLS F
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