| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4972 |
|---|
| Symbol | |
|---|
| ID | 8228578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6012471 |
|---|
| End bp | 6013667 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644932820 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003089337 |
|---|
| Protein GI | 255038716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.11556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTT TGTTGCTTTC CGGCGCATTG CTTTGCCAGG GACTGGCGAT CCCGGAACTT
GCTACTGCAC AAACCGGTAC CGACGCCCGC ATGATCACAT TTGCCACCTA CAACGTGAGT
ATGGAGGCCG AGAACTACGT GCCGCGGGGC ACGCCGGGAA ATTCGGAACA GGTGCTGATC
AAAGAACTTG CCTCGGGCGC CAACCAGCAG ATCAAAAACA TTGCACAGAT CATCAAAACA
GTGCGCCCGG ATGTGATTTT GCTGAATGAG TTCGATTACA TCAAAAACCC GGCGGAGGGT
GTCGGTCAGT TTATTAAGGG GTATTTAAAT GAAGATTCGA ACGGCGCAAA AGGCATCGAC
TATCCTTACT ACTATTATTC GACAGTCAAT ACCGGCCAAC CCAGCCCGTA CGACCTCGAT
CAGAACGGCA AAATGGAGCA GCTCGGCGCC GACGCGTGGG GGTTCGGCAA CTATCCGGGC
CAATACGGGA TGGTGCTGCT ATCCCGCTTC CCGATCGACA CCGCAGCGGT GCGCACGTTC
CAGCATTTCA AATGGAAGGA CATGCCCGAT GCATTCAAAA CCACCAAAGA AGACGGCTCC
GACTGGTACA GCCCCGAAGC CTGGGCGCAG TTTCCACTCT CTTCCAAATC GCATTGGGAC
ATTCCGGTGA AAGTGGGCGA TAAAACCATC CACATCCTCG CCAGCCACCC CACGCCCCCC
ACTTTCGACG GCAAAGAAGA CCGTAACGGC AAGCGCAACC ACGACGAAAT CCGCTTCTGG
AATGACTACA TCACCCAGGA AAAAGGCCGC TACATCTACG ACGACAAAGG CCAAAAAGGC
GGCCTGCCCG CCAACGCCTC GTTCGTAATC CTCGGCGACC AGAACGCCTC CCCGGACGAA
GGCAACGCCA TCACCGGCGG CATCCGCCAG CTCATCAGCA ACCCGGCCGT GAATGGCGGC
ACCGCCCCGG CCAGCAAAGG CGGCGCCGAG CATTCACCCG GCAACGCATT TGCCAAAAAC
CACACCGCAT TCTGGCGCAT GCGCGCCGAC TACGTGCTCC CCTCGCGCCA AGGCTTCCAA
ATCCTCGACA GCGGCGTCTT CTGGCCCGCC AAAGGAGAGC CAATGGCCGA GCTGGTAGAG
AAGCGGGAGT CGAGCTCGGA TCATCGGTTG GTTTGGGTCA GGGTTAGGTT GGATTGA
|
|---|
| Protein sequence | MKSLLLSGAL LCQGLAIPEL ATAQTGTDAR MITFATYNVS MEAENYVPRG TPGNSEQVLI
KELASGANQQ IKNIAQIIKT VRPDVILLNE FDYIKNPAEG VGQFIKGYLN EDSNGAKGID
YPYYYYSTVN TGQPSPYDLD QNGKMEQLGA DAWGFGNYPG QYGMVLLSRF PIDTAAVRTF
QHFKWKDMPD AFKTTKEDGS DWYSPEAWAQ FPLSSKSHWD IPVKVGDKTI HILASHPTPP
TFDGKEDRNG KRNHDEIRFW NDYITQEKGR YIYDDKGQKG GLPANASFVI LGDQNASPDE
GNAITGGIRQ LISNPAVNGG TAPASKGGAE HSPGNAFAKN HTAFWRMRAD YVLPSRQGFQ
ILDSGVFWPA KGEPMAELVE KRESSSDHRL VWVRVRLD
|
|---|
| |