Gene Dfer_4968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4968 
Symbol 
ID8228574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6009695 
End bp6010960 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content47% 
IMG OID644932816 
Producthypothetical protein 
Protein accessionYP_003089333 
Protein GI255038712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.092555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT GCTCTATCCG GCGCGCGGCG CTGGTGATTG CTTTTGCCTT TGTGTTTGGA 
TGTAAAGACA CGGGTGAAAA AGCAAATGTG CTCCCCTCCA ACGACTTCAC CGTCGAGCAA
GCTCAGCAAT GGTTCTCCGA TTTTCAAAAA TCAGCCCGAA GTTTTGGCCA GGCCGGCGAC
CGGGTGATTT GGGGCGCTGC GACGCAGAGA AAAGTAACCG CCGACGACGA AATTGTGGTA
GCGCCCGTCC TCTCGGGCAA TTTCCTCGGA TGCCGCATTA AAGACGGCCG CAAAGACAAG
CGGAAACCTG ACGAGGAATA CATTGCCGGC AGAATCCAGC GAAGCCTCGT TGTACGCAAG
GTTCGGGGAA AGATCGAAGC GATGGAAATG CGGACGGTCT ACGACGCCGA TTATGAGCCG
AGGACAGTAA ACGGGCGGAC CGATACTTCC AATTTTGAAG GGAAAGTTTA CTTTTTCGAC
ATGAATGGCA AACTGGTGAA TGGGCTGATC TACGAATCAG GAAAGCAGGT AGCCATGTTT
GGGCCAGTTA AAGGCGGCCG GACTTCCGAT ATGGTGGAGG TTTGCACGGA TTGGTACCAT
CAGGGATGTG TGGATGGATA TGGTTGTTCG GGATGGGTTT ATCAGGAGAC GACTTGCGAG
ATGGTGTATA TCGGCCAAAG CTCGGGTGGT ACAGGGACTG TTTGGTCGAA TTCGCTCGAT
GTAACACTCA CCGGCGGAAG TGATGTGCTG TTTGAAGCCT TAATGCAATT GCCCTACGTA
TCGGAATTAT GGGGTAGTAT GAACCAAACG GAGAAAGATT ATTTTCAAAG TAGAAAATGG
TTAATTCCAC AGGCCGCCTT CGCATGGGGA TCAGCTAAAG TATTTGTCCA ATTATTCTAT
TGCAATGATT CTGACGACGG AAATTGGAAT GCATTTAAGC ACGCTGCTTG GTCGGCATTT
CTATGCATGC AATTTGGTGT CTCCACTACT CTTGAAATTA CCAATAACCA TGAATTGCTT
TCTCCAGTGA ATCAAAAAAC TATGGATTTA TTTAACAATG ATCTGGGTAT CAAGGCTTAT
AAGAAAATGA GTGCCACATT AGCCTCGATG CCTGCTTATA ATCCTGGCCC AAAACTAGCC
CTGATCGCGA ATACTATTTT GCAAAAAATT ACAGAAGGAA TGGGCGTAAG GCTAGCCCCA
GAGAACGTTC CAGAGGGTAC ATTTCAAATG TTCATGTCGA CAGATGAGAC TGGTTTATGT
AATTAA
 
Protein sequence
MKKCSIRRAA LVIAFAFVFG CKDTGEKANV LPSNDFTVEQ AQQWFSDFQK SARSFGQAGD 
RVIWGAATQR KVTADDEIVV APVLSGNFLG CRIKDGRKDK RKPDEEYIAG RIQRSLVVRK
VRGKIEAMEM RTVYDADYEP RTVNGRTDTS NFEGKVYFFD MNGKLVNGLI YESGKQVAMF
GPVKGGRTSD MVEVCTDWYH QGCVDGYGCS GWVYQETTCE MVYIGQSSGG TGTVWSNSLD
VTLTGGSDVL FEALMQLPYV SELWGSMNQT EKDYFQSRKW LIPQAAFAWG SAKVFVQLFY
CNDSDDGNWN AFKHAAWSAF LCMQFGVSTT LEITNNHELL SPVNQKTMDL FNNDLGIKAY
KKMSATLASM PAYNPGPKLA LIANTILQKI TEGMGVRLAP ENVPEGTFQM FMSTDETGLC
N