| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4962 |
|---|
| Symbol | |
|---|
| ID | 8228568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6001311 |
|---|
| End bp | 6002537 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644932810 |
|---|
| Product | Alanine dehydrogenase |
|---|
| Protein accession | YP_003089327 |
|---|
| Protein GI | 255038706 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.699914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAAC CTCAGATTAC CGGTTTTGAA GAGCTCGCCA AGCAGTCGGT GCTGTACCCT
CAGGAATCAT TAATGGCCGT CCGGAAGGAC CAGAACTCGT TGCATATCGG CTTGCCGAGG
GAAGTTTCGT TGCAGGAAAA CCGCATTGCG CTCACACCCG ACGCGGTGGG GATCCTGGTG
AGGAACGGGC ACGAAGTGTG GGTGGAGAAA GATGCGGGAA AAGGCGCTAA CCTGTCGGAC
CACGAGTACA GTGAGGCCGG CGCGAAGATC GTTCATAGCC CGAAAGAAGT TTACCAGGCT
AATGTGATCC TCAAAGTGGA GCCGCTGGTG GAAGAAGAAT TCGGCTATGT GAAAGCGGGT
ACGACGGTAA TCTCCGCATT GAACCTTCCT TCATTAGAAA AGCAATATTT TGAAAAACTC
AATGAACTGA AAATAACCGG CATCGGCTAC GAGCTGATCG AGGACAAGGT GGGCGGCAAG
CCGATCATCC GAGCGATGGG CGAAATTGCC GGCAGCACCG TGCTGCTGAT CGCCGCGGAA
TACCTTTCGA CACCAAACGG CGGCCGGGGG GTAATCCTGG GCGGCATTAC CGGTGTGCCG
CCGACCAAAA TCGTGATCCT CGGAGCGGGA ACCGTGGCCG AGTTTGCCAC ACGCGCGGCG
CTGAGCCTTG GCGCGGACGT GAAGGTTTTT GACAAACACA TTTACCGCCT GCAAAGACTC
AAATACTCGA TCGGGCAAAA TTTATACACC TCCATTATCG ACTCTGAAAC ACTGGCGGAG
GCCATTGGCC GGGCGGATGT GGTGATCGGC ACCATGCGGG CCGAGAATGG GCTTAGCCCG
ATGGTCGTGA CGCGCGAAAT GGTGTCACAA ATGAAGCCGG GTTCGGTGAT TATCGATGTG
AGCATTGATC AGGGCGGATC GTTTGAGACC TCGCGCATGA CGACGCATAA AAACCCGACA
TTTAAATACA ACGAAGTAAT CCATTACTGC GTGCCCAACA TCCCCTCGCG CGTGGCGCAC
ACCGCGAGCA CGGCGCTGAG CAATGTATTT TTACCGTTTT TGCTGCAAAC CGGCACAATC
GGCGGTATCG AGGAAATGAT TTATGCGAAC CGTTGGTTTA TGAAAGGAGT GTATTGCCAT
AAAGGAACGC TCACCAACTC ACACATCGCC CGCAGTTTTA ACATGAGGTA TAAGGATCTG
ACATTACTGC TGGCGGCCAG GATGTAG
|
|---|
| Protein sequence | MPQPQITGFE ELAKQSVLYP QESLMAVRKD QNSLHIGLPR EVSLQENRIA LTPDAVGILV
RNGHEVWVEK DAGKGANLSD HEYSEAGAKI VHSPKEVYQA NVILKVEPLV EEEFGYVKAG
TTVISALNLP SLEKQYFEKL NELKITGIGY ELIEDKVGGK PIIRAMGEIA GSTVLLIAAE
YLSTPNGGRG VILGGITGVP PTKIVILGAG TVAEFATRAA LSLGADVKVF DKHIYRLQRL
KYSIGQNLYT SIIDSETLAE AIGRADVVIG TMRAENGLSP MVVTREMVSQ MKPGSVIIDV
SIDQGGSFET SRMTTHKNPT FKYNEVIHYC VPNIPSRVAH TASTALSNVF LPFLLQTGTI
GGIEEMIYAN RWFMKGVYCH KGTLTNSHIA RSFNMRYKDL TLLLAARM
|
|---|
| |