Gene Dfer_4959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4959 
Symbol 
ID8228565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5997440 
End bp5999374 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content56% 
IMG OID644932807 
Producthypothetical protein 
Protein accessionYP_003089324 
Protein GI255038703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAC TACTACTGGC ATTTGCGCTG GTGATACCGC TGCATATCAG TGCACAAGTC 
ACCCAGCGTA ACATTCTTGC CCAAAAGTAT ACGCAGAGCG CATTCAGCGA AGCCCTCATC
CCGCTCGATC AATGGGCCCC CTACCCCAAA ACACCCGAAG AATGGCGAAG CAAAACCGAC
CCGGCGCAGC TAGCGAAAAT CATTCAAACC GGCGAAGAAG CGCTGGAAAA GCCTATTGCC
GCCGTTTCGG CCAGCCTCCT GCTCGATTTT ACCCGCAGCG GTGACCGCGA AAGGCATTCG
GCAGCGTCGT TTGGGCGGAG AAATCAGCTG ATGAGCCTTG TGCTAGCAGA AGCCGCGGAA
GGCAAAGACC GTTTCACGGA AACCATCCTG AATTCAGTAT GGGCGATTTG CGAGGAAACT
TACTGGGGCG TGCCGGCGCA TTTGAGTGTA CAAAAAGCCA AAAACGGTCT GCCCGACGCC
CAGGACCCGA CTGTCGACCT TTTCGGCGCC GAAACGGCAG CCGTCCTAGC CCTTACCGAT
TATTTTTTGG GAGAAAAACT CGATAAGATC TCGCCGCTCA TCCGCCCGCG CATTTATGCT
GAAACCAACC GGAAAATATT CGAACCGCTG CACGACGCTC AGCGCTACGG CTGGCTGAGT
ACCACTAAAC CGGTGAATAA CTGGAACCCG TGGATCGTGT CGAACCTGCT CATTGCCGAT
CTGTTGCTGG AAAGGGATCT GCAAAAACGC GGCGCCAACG CATACCAGTA CATGGTGTTC
CTGGATCGCT ATTTCAACAG CCTGGGCGAC GACGGCGGCT GCGACGAAGG ACCAAGCTAC
TGGTTTGCCG CCGGAGCCAG CGCCTACGAC GCGCTGGCGA TCCTCGAAAG CGCCACAGAT
GGCAAAATTG GCATTTACGA CAACGATCTG ATCCGCAAAA TGGCCACCTA TGTTTACAAA
GTCCACATTG CCGACGACTA TTTCGTAAAC TTCGCCGACG CCGATCCGAA ACTGAAACCG
GACGGCCTCA TGCTCTACCG CTTCGGCGAG GCCGTAAATG ACCCGGCGCT GGCCGCTTTC
GGCGAGTGGG CTTACGGGCG GTTTGGAGCG GTGGCCGGCG GGGAGGGCTT TCACCGGCCG
CGGAAGATAT GGAACCTGCT CACGACCTCG GAATTGAAGC AGGATCAAAC CAAAACCTAT
GAACCGGTGG CGCATTCCTG GCTGTCGGAC ATTGAGGTGC TGACGGCGCG CTCGGCCAAT
GGCCTTTACC TCGCCACCCA CGCCGGGCAC AATGCCGAAA GCCACAATCA CAACGACGTG
GGCGATTTCA TCGTGTATGC CGACGGCGAG CCGGTCATCG TGGACGCGGG CCGGGGCAAC
TACACCGCGC GCACGTTTTC GCCAAGGCGC TACGAGCTCT GGTTTACAAG ATCGGAATAC
CATAATGTGC CGATTGTCAA TGGCTTTGGC CAACCGGCCG GCAAGCAGTA CAATGCGCGG
AATGTAAAAA GTAATGTCTC CGACAAAGAA GTGTCGCTCG CGATGGACAT TGCGCCGGCA
TTCGCGCCGG AAGCGGGCGT GCAAACGTGG AACCGCAGTG TGAAGCTGAA TACGGTTAAA
AACGTCGTGG AAGTTGCTGA CGACTACATA TTGAAGCAGA AGCCGGATTC ATTGCAGCAG
ATATTCATGA CCGTCTGCAA AGTCGACACC GGCACGCCGG GCAAAATCAT CCTGACCACG
CCCGGTAAAA AATCGGTTTC GCTCACTTAT GATCCCAGGC AATGGTCCGT TTCCACCGAG
TTGCCTTCCA CCGACGGAAT GGAATACAGA AGTTTCAAAA CCAAGTGGGA CGGCAATCCG
GTGACGCGCA TTGTACTCAC CAGCAAAGCC CTGAAACCCA AAGGCAAACA TAGTTTCGTC
ATTACTAAAT CCTGA
 
Protein sequence
MIRLLLAFAL VIPLHISAQV TQRNILAQKY TQSAFSEALI PLDQWAPYPK TPEEWRSKTD 
PAQLAKIIQT GEEALEKPIA AVSASLLLDF TRSGDRERHS AASFGRRNQL MSLVLAEAAE
GKDRFTETIL NSVWAICEET YWGVPAHLSV QKAKNGLPDA QDPTVDLFGA ETAAVLALTD
YFLGEKLDKI SPLIRPRIYA ETNRKIFEPL HDAQRYGWLS TTKPVNNWNP WIVSNLLIAD
LLLERDLQKR GANAYQYMVF LDRYFNSLGD DGGCDEGPSY WFAAGASAYD ALAILESATD
GKIGIYDNDL IRKMATYVYK VHIADDYFVN FADADPKLKP DGLMLYRFGE AVNDPALAAF
GEWAYGRFGA VAGGEGFHRP RKIWNLLTTS ELKQDQTKTY EPVAHSWLSD IEVLTARSAN
GLYLATHAGH NAESHNHNDV GDFIVYADGE PVIVDAGRGN YTARTFSPRR YELWFTRSEY
HNVPIVNGFG QPAGKQYNAR NVKSNVSDKE VSLAMDIAPA FAPEAGVQTW NRSVKLNTVK
NVVEVADDYI LKQKPDSLQQ IFMTVCKVDT GTPGKIILTT PGKKSVSLTY DPRQWSVSTE
LPSTDGMEYR SFKTKWDGNP VTRIVLTSKA LKPKGKHSFV ITKS