| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4958 |
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| Symbol | |
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| ID | 8228564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5996484 |
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| End bp | 5997431 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932806 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003089323 |
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| Protein GI | 255038702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.91876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTAT CCCGCAGAGA TTTTATCGTC CGCAGCGCCC TCGCCGGCAG CATTATTCCT
TCATTAACTC AGGAAACATT CGCACGGCCC GCTCATGCGG CGGATGATCT TAAAGTCAAT
ATTTTCTCCA AACATCTGCA ATTCCTTAAC TACCAGGACA TGGCCGAAGC GGCCAGAGAA
CTCGGCTTCG ACGGCATTGA CCTGACCGTG CGCCCCAAAG GCCACGTGTT GCCCGAAAAA
GTGGAAACAG ACCTCCCGCT GGCCGTGGAA GCGATGAAAA AGGTAGGGCT TGCGCCGCAA
ATGTTCTGCA CTGCCGTGGA GGATGCCGCC AACCCGGTCG ATAAAAAACT GCTCGAAACG
GCCGCCAAAC TGGGCTTCAA ATATTACCGG ATGAACTGGT ACCGCTACAA CGAGCAGAAA
AGCATTCCCG AGCAGCTCAG CGAATTTGGC GGCAAAATGG CCGGTTTGAG CCAACTGAAT
GAAAAGTTGG GCATTAACGG GTGTTACCAA AACCATTCGG GCAGGATGGT GGGCGCTTCG
ATGTTCGAAA TATGGCAGAT CCTTCAAAAG GCCAATCAGC AAACAATGGG CGCGCAATAC
GACATTCGTC ACGCGACAGT TGAAGGCGGG CTTTCGTGGC AAACCGGCTT TAACCTGATC
CGGCCGCACA TCAAAACGAT CGTGATCAAG GATTTTTACT GGGAGAAAAA CAGCAGCGGC
AAATGGGCCG TAAAAAGCGT GCCGCTGGGC GAGGGAATGG TGGATTTTAA AACCTATTTC
AAACTGCTGA AAGATTTGCA GGTGAATGTG CCGATTTGCC TCCACCTTGA ATACCCGCTG
GGCGGGGCCG ACCAGGGTGC GTATCAGATC ACGGTGGATA AAAAAGTCGT TTTCGATGCG
ATGAAACGTG ATTTACAGAA ACTGAAAGAT CTCTGGGCCG CCGCATAA
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| Protein sequence | MNLSRRDFIV RSALAGSIIP SLTQETFARP AHAADDLKVN IFSKHLQFLN YQDMAEAARE
LGFDGIDLTV RPKGHVLPEK VETDLPLAVE AMKKVGLAPQ MFCTAVEDAA NPVDKKLLET
AAKLGFKYYR MNWYRYNEQK SIPEQLSEFG GKMAGLSQLN EKLGINGCYQ NHSGRMVGAS
MFEIWQILQK ANQQTMGAQY DIRHATVEGG LSWQTGFNLI RPHIKTIVIK DFYWEKNSSG
KWAVKSVPLG EGMVDFKTYF KLLKDLQVNV PICLHLEYPL GGADQGAYQI TVDKKVVFDA
MKRDLQKLKD LWAAA
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