Gene Dfer_4948 details

Gene Information

• Locus tag: Dfer_4948
• ID: 8228554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: +
• Start bp: 5981140
• End bp: 5984691
• Gene Length: 3552 bp
• Protein Length: 1183 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644932796
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003089313
• Protein GI: 255038692

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.571754
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.80828
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCGCGA AACGCTTACT GCCCGTTTTA ATAGGGGTTG TCCTGCTGGT ATCCTGCAAA 
AAAGAGCTGA AAACCTTCAC CGAATTGCCG GCAGGCGAAA CGGGTATCCA TTTCTCCAAT 
CGCATCGCGG AAAACGATAC GATGAATATC CTGGCATTTG AATATGTGTA CAATGGCGGC 
GGGGTTGCGC TGGGAGATTT CAACAATGAT AGTCTGCCAG ACGTGTATTT TACCGGTAAT 
ACTACGCCCA ACAAGCTGTA TCTCAACAAG GGAGATTTTA AGTTTGAAGA CGTTACGGAC 
CAGGCGGGCG TGGCACCAAA AGACAAATGG TCGACTGGCG TGGCTCTGGT GGATATTAAT 
CACGACAATC TGCTCGATAT TTACGTGTGT GCGTCCGTGC GGAAGTCGGC GCAGCAGCGG 
GAAAATCTTT TGTATGTAAA CCAGGGCCTG AATGCCGATA AAGTGCCGGT TTTCAAGGAA 
ATGGCAAAGG AATACGGCAT TGCCGACACC ACCCACACCA CGAATGCGGC TTTCTTCGAT 
TACGACAACG ACGGCGATCT GGACCTGTTC CTGATCGTGA ACGAGATGGA CGACAACAAT 
TTCCCTAATA AGTATCACAA AAAAATCGTC GACGGATCGT CGCGGCGCAC CGATCGCCTT 
TATCGCAATG ATTGGGACGC GAAGCTTAAC CATCCCGTGT TCACCAACGT GTCCCGTGAG 
GCGGGGGTTC TCATTGAAGG TTACAGCCTG GGAATCAACG TGACGGACGT GAATCAGGAT 
GGCTGGAAGG ACGTGTACAT CACGAACGAC TACCTTACGA ACGACCTGCT TTACATAAAC 
AATGGCAACG GGACATTCAC GGATCGCGCG CCGACCTATT TCAAGCACAC TTCGCATTCG 
GCGATGGGTA ACGACGTGGC CGATCTGAAC AATGACGGCC TGATGGACGT CGTGGCCGTA 
GATATGATGC CCGCCACTAA CCGCCGCAAA AAAATGATGA CGCCGGCTAA CAGTTATGTG 
ACTTATCAGA ACAACGAACT GTTCGGTTAT CAGTATCAGG TGGCGCGGAA TACGCTGCAA 
CTAAACATGG GAAGTGCCGT TCCGGAGGAT AAATCGCCGG TTTTCAGTGA AATCGGATTG 
CTGAGCGGGG TAGCGGAAAC GGATTGGAGC TGGACACCGA TGGTCACTGA TTTCGACAAC 
GACGGCCTTC GGGATATGAT CATCACCAAC GGCTTCCCGA GGGATATTAC CGATCTTGAC 
TTCATCGCTT ACCGCAACGA AGTGTCAAGC ATCATGGCCC CCATGATGAT GCTCGACTAC 
ATTCCGAGCG TCAGGATCAC GAATTTTGCA TTTAAGAACA AAGGCGATCT GACCTTCGAA 
GATGTGAGTA AAGATTGGGG CATCGAAACG CCCGGCTTTT CGAACGGCGC AGCTTACGCG 
GACCTCGATA ACGACGGTGA CCTTGATTAC ATCGTCAATA ATATCAACGA TTCGGCGATG 
GTTTATCGCA ACAACAGCAT TCAACTCAGG CCTCAGGAAA GCAATTATCT GCGGATTGCG 
TTTAAGGGTG AGCGTTACAA TGGCGCTGGG ATAGGGGCCA TTGCGGAAAT TACATTAGCG 
AACGGTAAGA AACAGGTAGC CGAAAACTCG CCTTACCGTG GGTATCTTTC CACGGTAGAG 
CCTGTTCTGC ATTTCGGTCT GGGCAAAGAA AGCGCTGTGC AGGAAGTGAA AGTGACGTGG 
CCTGGTGGTA AAACGCAGGT TTTGAAAAAT GTGAAAGGAA ATCAAACGCT GGTAGTTCGT 
GAAAAAGACG CCGGGGCTGC GCCTGGGGAT CGCAAAACGC CGGCTATTCC GTTATTTAAG 
GACATTACCA GCGAATTGAA TGTGTCGTAC AAGCATTCAG AAATGGACGT GATCGACTTC 
AATGTGCAGA AATTATTGCC TCATAAAATG TCGCAATACG GTCCGGCACT TGCTGCGGGT 
GATGTGAATG GCGATGGGTT GGAAGATGTA TTTGTAGGCG GGGCGTACCA GAACAAAGGG 
CGTTTTCTCC TCCAACAGCC GGATGGTAAA TTTACCGTGG CCGACCTCCT TCCGGGCGCC 
GACGGGCTTG AAAAGGCATC CGAGGATATG GGTGTGTTGC TGTTCGATGC GGATCTGGAC 
AAAGACCTTG ACCTCTACAT TGTCAGTGGA AGTTACGAAA TACAGGAAGG GTCCGAAGCA 
TTGCGGAATG TATTGTATCT GAATGACGGA AAGGGTCAGT TTAAGCAGGA TACCGCAGCA 
TTGCCCGCGT TTCTGGTGAA TGGCTCGTGC GTGAAAGCCG TCGATTTCGA TCGCGACGGC 
GACCTGGATT TGTTCGTCGG AGGCCGGGTG GAGTCGGGGA AGTATCCCAA ACCGGTTTCG 
AGTTACATTC TGCGTAACGA TTCAAAAGGC GATCTTGTGC GATTCTCAAA TGTCACGCGG 
GCGGTAGCGC CTGATTTGGC TGAAATCGGC CTCGTTTGCG ATGCGCTCTG GACAGACTAT 
GACAACGACG GCTGGGCCGA CCTCCTGCTG GCAGGTGAAT GGATGGCGCC GACATTCCTG 
AAAAACGAAA AGGGTAAATT CAAAAAGGTA GCCACGGGCC TGGAAGCCAA AAAAGGCTGG 
TGGGGCAGCC TCGCAGCGGG CGATTTCGAC AACGACGGCG ATATGGATTA TATTGGCGGA 
AACCTGGGCG TGAACACGCT GAGCCGGGCT TCGGAAAGTC GCCCCGTGAG CGTGTATGCG 
AAAGATTTCA ACAATGACGG CTATTTCGAT GCGATACCGA CCATTTTTTA CCGGGCGCAG 
GATGATAGCT ACAAGGAGTT TCCGTATAAC ACCCGCGACG ACATGGGCAA GCAGGTAATA 
CAAGTGCGCC AGCGCTTCCA GGAATATGGA AAATTCGCGG AAACGACGCT GACGCAAATT 
CTGAAACCGG AGGAGCTGAA AGATGCCTTG CATTTGTCGG CCACGTGGAT GAAAAGCAGC 
TACATTGAAA ACCTTGGCAA CAATCAATTC ACGATTCGCG AATTACCCGT TCAGGCGCAA 
TTCGCCCCCC TTTTCGGGAT GATTGCCGAT GATTTTGATC AGGATGGTAA CCTCGATCTC 
ATGCTTTCGG GCAACGATTA TGGCTCAGAA GTGTCGGTAG GGCGGTACGA TGCGATGTAC 
GGCCTGGTGC TGAAAGGCGA CGGCAAGGGT AATTTCCATC CGCTGAGTAT TTTAGAGAGT 
GGATATATGG CTCCCGGTAA CATGAAAGCG CTCGTTCGCC TCGCATCAGC CAATGGTAAA 
TACCTTTCCG CGACCTCCCA AAACCGGGAC ATGATTCGTT TTCACGAAGC GCAAAAAGCC 
GTTCGAAAGG TGGATTTAGC CGATGGGGAA ACGTCTGTCA TTTTACATTT TAAAAATGGC 
AAGTCCAGAA AGGAAGAGCC GGGTTACGGT TCATCGTTTC TGTCTCAATC GAGCCACACG 
TTGTTTGTGC CGGAATATGT TTCTTCCATA ACCATTATCA ACTCCAAAGG CGGGAAAAGA 
CAGGCGAAGT AA 

 

Protein sequence

MSAKRLLPVL IGVVLLVSCK KELKTFTELP AGETGIHFSN RIAENDTMNI LAFEYVYNGG 
GVALGDFNND SLPDVYFTGN TTPNKLYLNK GDFKFEDVTD QAGVAPKDKW STGVALVDIN 
HDNLLDIYVC ASVRKSAQQR ENLLYVNQGL NADKVPVFKE MAKEYGIADT THTTNAAFFD 
YDNDGDLDLF LIVNEMDDNN FPNKYHKKIV DGSSRRTDRL YRNDWDAKLN HPVFTNVSRE 
AGVLIEGYSL GINVTDVNQD GWKDVYITND YLTNDLLYIN NGNGTFTDRA PTYFKHTSHS 
AMGNDVADLN NDGLMDVVAV DMMPATNRRK KMMTPANSYV TYQNNELFGY QYQVARNTLQ 
LNMGSAVPED KSPVFSEIGL LSGVAETDWS WTPMVTDFDN DGLRDMIITN GFPRDITDLD 
FIAYRNEVSS IMAPMMMLDY IPSVRITNFA FKNKGDLTFE DVSKDWGIET PGFSNGAAYA 
DLDNDGDLDY IVNNINDSAM VYRNNSIQLR PQESNYLRIA FKGERYNGAG IGAIAEITLA 
NGKKQVAENS PYRGYLSTVE PVLHFGLGKE SAVQEVKVTW PGGKTQVLKN VKGNQTLVVR 
EKDAGAAPGD RKTPAIPLFK DITSELNVSY KHSEMDVIDF NVQKLLPHKM SQYGPALAAG 
DVNGDGLEDV FVGGAYQNKG RFLLQQPDGK FTVADLLPGA DGLEKASEDM GVLLFDADLD 
KDLDLYIVSG SYEIQEGSEA LRNVLYLNDG KGQFKQDTAA LPAFLVNGSC VKAVDFDRDG 
DLDLFVGGRV ESGKYPKPVS SYILRNDSKG DLVRFSNVTR AVAPDLAEIG LVCDALWTDY 
DNDGWADLLL AGEWMAPTFL KNEKGKFKKV ATGLEAKKGW WGSLAAGDFD NDGDMDYIGG 
NLGVNTLSRA SESRPVSVYA KDFNNDGYFD AIPTIFYRAQ DDSYKEFPYN TRDDMGKQVI 
QVRQRFQEYG KFAETTLTQI LKPEELKDAL HLSATWMKSS YIENLGNNQF TIRELPVQAQ 
FAPLFGMIAD DFDQDGNLDL MLSGNDYGSE VSVGRYDAMY GLVLKGDGKG NFHPLSILES 
GYMAPGNMKA LVRLASANGK YLSATSQNRD MIRFHEAQKA VRKVDLADGE TSVILHFKNG 
KSRKEEPGYG SSFLSQSSHT LFVPEYVSSI TIINSKGGKR QAK