| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4942 |
|---|
| Symbol | |
|---|
| ID | 8228548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5972469 |
|---|
| End bp | 5973887 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644932790 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003089307 |
|---|
| Protein GI | 255038686 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTAGACTTAT AGCCAAGATA TTACCCCTGC TGGTCCTGCT GCTGACGGCG
TGCGACAAGT TCCTGGACGT GAATACCGAC GAAACCCTCA AAGGTGACGC CACCATGCAG
GAGCTTCTGC CGACGGCCCA GTTTTATACC GCCGAAGCGA GCTTCCAGCA GGCATATGTG
GCCTGCCAGT ACGCGCAGCA GCTCGGCAGC GCCCTGGGTG CCAACGGAAT CGATACCTAT
GCCGAAACGG ACAACACACT GGGCTGGTCG AACTTCTATT TGTATGCTTT GCCGCAACTG
AATGCGATCA TTGAAAAAGG GCAGGAGGAA GCGACACCGG CCTATGTGGG TATTGCCAAA
GTGCTCACGG CCTATAACCT CGGGATAGCC ACCGCGAGCT GGGAGAATGT GCCCTATACC
GAAGCCGATC AGCAAAATTT CTCGCCCGCG TACGACACGC AGGAGCAGGT TTACGCGACA
ATTTTCCGTT TGCTCGACGA GGCAGTTACC GAGTTAGCCG GCAATACCGG CGCAAAGCCC
GGCCAGGACG ATCTGATCTA TCAGGGTGAT TTGGGCAAAT GGACCCGCCT CGCACATTCG
CTGCGTGCCC GCTATGTATG GCATGGTTCG TTGCGTAACC CCGCGCAGGC TGCCCAAAGT
GTGCTGGCGT CGCTGGAAAA AGGGATGACG GGAAATGAGG ATGATTTTCA GCTACAATAT
AATTCCAAAA ACCTGAGTCC GTGGTACAGT AAGGTGGCTG TGCCGAACAC GACGGGAAAC
CTCTCCGTGA CATTTACGAA TACGATCGTC GACATGTTCA ATGGCACCGC GCAGGGCGTT
GCCGACCCGC GTTTGTCGAA GGTAATCGGG TTAAAAAACA ACCAAACGGT CTATTCGGGC
GTCATTCCCG GCTCTGGGAG CGGCTCAACG GTGGATTTGA ACAACAAAGC CTGGCATTCA
AATATCAACT CGCCGCTGGT GATGATGACC TATTCGGAAT TAAAAGGCAT TGAGGCAGAG
GCGAGAATGG CCCTGCATGG CGGCACAGGA ACTTCCGCGG AAGGTTATGC GGCCTATCAG
GCGATGCTTG CCGCCAACAT GGAGAAGGTA GGTGTAGAAG CGGCCGATAT GGAAAAGTTT
CTGAAAGATC CGAAGATCAA TGTGGGCGCC GCGAAACTCA CGGCTGAACA GATTATCCGT
GAAAAATTCA AATCCATGCT GCTGATCGGG GACATCTGGA CGGACATCCG CAAATATGAT
TACCTCGATT TCCCCATGCC CGTAGGCGTA AACCCCGATC TCGACGGCCA ACGCATTCAG
CGCATGAAAT ACCCCGACTC CGAGATCACC CGCAATTCCA AAACCGTGCT GGCTAACCAG
AAAGATCCCG AGGTCCCAAT GTGGCTGATC GGTAAATAG
|
|---|
| Protein sequence | MKKIRLIAKI LPLLVLLLTA CDKFLDVNTD ETLKGDATMQ ELLPTAQFYT AEASFQQAYV
ACQYAQQLGS ALGANGIDTY AETDNTLGWS NFYLYALPQL NAIIEKGQEE ATPAYVGIAK
VLTAYNLGIA TASWENVPYT EADQQNFSPA YDTQEQVYAT IFRLLDEAVT ELAGNTGAKP
GQDDLIYQGD LGKWTRLAHS LRARYVWHGS LRNPAQAAQS VLASLEKGMT GNEDDFQLQY
NSKNLSPWYS KVAVPNTTGN LSVTFTNTIV DMFNGTAQGV ADPRLSKVIG LKNNQTVYSG
VIPGSGSGST VDLNNKAWHS NINSPLVMMT YSELKGIEAE ARMALHGGTG TSAEGYAAYQ
AMLAANMEKV GVEAADMEKF LKDPKINVGA AKLTAEQIIR EKFKSMLLIG DIWTDIRKYD
YLDFPMPVGV NPDLDGQRIQ RMKYPDSEIT RNSKTVLANQ KDPEVPMWLI GK
|
|---|
| |