| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4940 |
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| Symbol | |
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| ID | 8228546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5967331 |
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| End bp | 5969082 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932788 |
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| Product | peptidase M56 BlaR1 |
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| Protein accession | YP_003089305 |
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| Protein GI | 255038684 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.958869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATCC CTTACCTCAT GAAAGTCAGC CTGGTGCTGG CTGTGCTCAC GCTGGCGTAT
CGCTGGCTGA TCCAGTTCGA AACCTTCTCG AACCTAAACC GCGTACTATT GTGGGTCAAT
GTACTGGCTG CCTGGGCATT GCCGCTGGTG AACCTGCCCA GCTGGGGGCC AGTTGGAATG
CAAACGGACA TTCACGATAC GTTTCCAAAA GTGGTAGCGC AACTTCCTTT GCTTGCCGAA
CCGCTCGCTA CGATCCGTCC CGAACCTTTC AAGACGGAAA TCAGCACTGC CGTACCTTTT
ATGAGCGCCG GGGATTGGCT CCTCGCCCTG TATTTTGCAG GCGTGATTGT GCTCGCTGCC
CGTTTGCTTT TTCAGGTCGG CCGGTTGCTC CGGGTGGTAG CAACGGGGCG CGCAGAGCGC
ATTGCGGATG GTACGGCCAT TGTGCGCGTG GCGGGTGCTT CGCCCTATTC TTTTTTCAAA
TGGATCGTGC TCGATCCGGC GAGGCATTCC GATGGGGAGC TGCGCAACAT CATCGCCCAC
GAGGCCGGGC ATGCGCGGCA ATGGCATAGC GCCGATTTGC TGCTTGCGGA AATACAGAAA
ATATGTTTAT GGTTCAACCC GTTTTCATGG GCGCATCAAA GGCTTGTGCA CGAAAACCTC
GAATACCTGG CCGATCGCGC TGTGCTGGAC AATGGGTTTG AGAAGAAGCA ATATCAGTAC
AATCTGCTCA ACACCGCGAT GCAAAGCCGC GAACTGCCGC TGACGAACTC TTTCGCGCAG
TCGCTGCTCA AAAAACGCAT TCAAATGATG AACCGGAAGC CTTCGCATTT TATGGCTTGG
GTTAAATATG CGGCTGTTGT GACGCTGATT TACGTTTCAT CCGCATTTGT GGCGCCCTAT
CGCGAAGTGA TCGTCGAACT GGCGCCGGAG GTGATCAGGC CACTGGTAAA ACCCCTTATA
GCCGAAGTGA ATGCCGATAT TCCTTCCAAA CAAACCGATT TTGACCTTCC CGAAAACATT
CAACCCAAAG CAAAACCCCA GCCCGAACAA ATGGCCATTA CTGCCGACAG CCTGGATGAG
GCACCTCAAG CTGGCACGAA AGGTGTATTG ATCGTAAACC AGACATTGTA CTGGGCTATT
ACACCGCTCA CGACGTGGGA AGATATCACT GTTATCAGGA ATGCCGCGCA GAAGTATGGC
TATGCGTTAG CGATCAACAA CATCCGGTAC GATCCTCTGC AACAATACAT CACGGACGTG
TCGGTGAGCA TTACCGCTAA AAACGGCGGC GGCTCGGGTG AAGCGCATGG GGAAGGCGAA
TTTCAGCCGA TTAAGGGCTA CTCGGGCTAT ATTTCAGCCA GGGGACATAG CATGGGTGCC
ACGCCGCCGG AAGCGCTGAG TACAATAATG GAGCAGGATT ATCAGAAGGC ACAGGCGATG
GCCCGCCAAA ATGCGGTCGC CTATTTCGAA TACAAGCTCG GCAAAAGCCT GGGAACGCAT
ACCGCCAGCA CTTACACCCA GAAAATCCTG GCCGGGCCCA ACGCACGGCA GTTTTACGAC
AAGAACGGAA TCGGGCGATC ACAAGTGAGC ACCCTGCACA TTGCCAGCTA TCATAAAGAA
GCCAGTTTTT ATCTCAATGC GGGCAAATCT ACCTTCACGG AAGTGAACGA AGTACCATTC
TCGAAAGTTG ACCGTGTGAC CATGCTGGAA GACAGTGCCC GGCGAAAGTA CTTCGTCGTG
TATACCAAAT AA
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| Protein sequence | MMIPYLMKVS LVLAVLTLAY RWLIQFETFS NLNRVLLWVN VLAAWALPLV NLPSWGPVGM
QTDIHDTFPK VVAQLPLLAE PLATIRPEPF KTEISTAVPF MSAGDWLLAL YFAGVIVLAA
RLLFQVGRLL RVVATGRAER IADGTAIVRV AGASPYSFFK WIVLDPARHS DGELRNIIAH
EAGHARQWHS ADLLLAEIQK ICLWFNPFSW AHQRLVHENL EYLADRAVLD NGFEKKQYQY
NLLNTAMQSR ELPLTNSFAQ SLLKKRIQMM NRKPSHFMAW VKYAAVVTLI YVSSAFVAPY
REVIVELAPE VIRPLVKPLI AEVNADIPSK QTDFDLPENI QPKAKPQPEQ MAITADSLDE
APQAGTKGVL IVNQTLYWAI TPLTTWEDIT VIRNAAQKYG YALAINNIRY DPLQQYITDV
SVSITAKNGG GSGEAHGEGE FQPIKGYSGY ISARGHSMGA TPPEALSTIM EQDYQKAQAM
ARQNAVAYFE YKLGKSLGTH TASTYTQKIL AGPNARQFYD KNGIGRSQVS TLHIASYHKE
ASFYLNAGKS TFTEVNEVPF SKVDRVTMLE DSARRKYFVV YTK
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