Gene Dfer_4919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4919 
Symbol 
ID8228525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5946129 
End bp5947379 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content54% 
IMG OID644932768 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003089285 
Protein GI255038664 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.17095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAA TCCAAACACT TGTGGACCGT GCGATATTAC ATTTTGACCT GGATACCTTT 
TTTGTATCCG TAGAACGCAA GCAGGACAGC CGGCTGCAAA ACAAGCCTAT TCTGGTCGGT
GGCACGGGTG ACCGCGGGGT GGTCGCGGCT TGCAGCTATG AAACGAGGCA GTTTGGCGTG
CATTCGGGAA TGCCGATGAA AATGGCCCGG ATGCTTTGCC CGGAGGCGAC GGTCATCCGC
GGGAACGGCG AAACGTATTC GAAGCATTCC AAGGAAGTGA GCGAGATCAT CAGCCAGCAC
GTGCCGGTGT TCGAAAAAGC GAGTATCGAC GAGTTTTATG CCGATCTGTC GGGAATGGAC
AAGTATTTCA ATTGCTACGG CATGGCGTCC GATCTCCGGC AGCGTATTAT CCGTGAAACC
GGCCTGCCGA TTTCGTTCGG GCTGGCGACC AACAAGCTGG TGTCCAAGGT CGCGACCGGC
GAAGCGAAGC CTAATAATCA GCTGCGTGTA GAGCCAGGCG CCGAAAAAAC GTTTCTCGCG
CCGATGGAAG TGCAGAAAAT CCCGATGGTA GGCGACAAAA TGAACCAGAC GCTCAACAAC
CTCGGCATCC GGTACGTGAA AACGATCCAG GAAATGCCGA TGGAAATGAT GGGGAAAGTG
TTTGGAAAAA ACGGCGTTGC CCTCTGGAAC CGGGCCAATG GCCTCGACAA CTCCCCTATC
GTGCCGTTCC ACGAGCGGAA ATCCATTTCC AGTGAGCGGA CGTTCGGCAA AGACACGGGC
GATGTACGTA AAATGCGCGA AATGGTGCGC GCCATGGCCG AAACGCTGGC ATTCCAGCTG
CGGACCGGCG ATAAGCTCAC GTCCTGTGTG TCGGTCAAAA TCCGGTATTC AGATTTCAAT
ACATTTTCCA AACAGCTGAA AATAGCGTAC ACGTCGGCGG ACCACGTGCT GATCCCGCAT
ATCGAACGGC TTTTCGACCA GCTTTACAAC CGGCGTATGA TGGTGAGATT GGTCGGCGTA
AGTTTCAGCG ACCTTGTGAC GGGAAATTAC CAGATCAACC TGTTCGACGA CACCGAGGAA
CGCCTGAACC TTTACCAGGC CATGGATTAC ATCAAAACCA AATACGCCTA CAACAAAGAC
GGAGACCAGA TCCTGACCTG GGCCAGCACG ATGGGAATCT CAGACATCGG GAGCATGGGA
AACCCGTTCA ACGGCGAGCC GCCCATCATT CCGGCGCATA GGAATGCTTA G
 
Protein sequence
MKKIQTLVDR AILHFDLDTF FVSVERKQDS RLQNKPILVG GTGDRGVVAA CSYETRQFGV 
HSGMPMKMAR MLCPEATVIR GNGETYSKHS KEVSEIISQH VPVFEKASID EFYADLSGMD
KYFNCYGMAS DLRQRIIRET GLPISFGLAT NKLVSKVATG EAKPNNQLRV EPGAEKTFLA
PMEVQKIPMV GDKMNQTLNN LGIRYVKTIQ EMPMEMMGKV FGKNGVALWN RANGLDNSPI
VPFHERKSIS SERTFGKDTG DVRKMREMVR AMAETLAFQL RTGDKLTSCV SVKIRYSDFN
TFSKQLKIAY TSADHVLIPH IERLFDQLYN RRMMVRLVGV SFSDLVTGNY QINLFDDTEE
RLNLYQAMDY IKTKYAYNKD GDQILTWAST MGISDIGSMG NPFNGEPPII PAHRNA