| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4909 |
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| Symbol | |
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| ID | 8228515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5933019 |
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| End bp | 5934233 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932758 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003089275 |
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| Protein GI | 255038654 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.070438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTA ACCCCCAATC GGAAAAGAAC CGGATATTTC CTCCCGAAAT ACTGGAATAC
ACCGCTGACT ACCACTTCCA CCGCCACCAC ACCCGCTCCG GGCTGGTGTA CCAGGTGATG
ATCCTGATGA CGATCATCGC GTTCATCGGC CTGTTTGTGA TCGCCGTGGA TGTGAGCGTG
AAAAGTACAG GCATTATCCG CGCCACCGAC GACCGCAACG CGATCAAGGC GCTGGTAAGC
GGCCGTCTGG ATTCCGTGTT CGTCTCGGAA AACCAGCGCG TGCGGAAAGG GCAAACGCTC
CTCAAAATCG AATCGGGCAT TCTGCGGGAG CAAAACCAAC TCGTGAAAGC CCAGAAAGAC
GACTACCTCA ATCAGATCAA AGACCTCAAT ATTCTCCTGC ATTTGAGCCG CACCAACAAT
TGGAGCAAAA AGCCGGGCCT TTCAAGCGGG CTCTACAAGC AGGATTTCGC ATTGTTCTGG
CAAAAGATCG GCGACGCCAA AAACACCCTG GTGACCGTGG AAAAGGATTT TGCGAGAAGC
AAAAAGCTGT GGGATGTGCG GGCCATCTCC GAGGCCGAAT ACGACCGGGC AGTGCTGCTC
CACAGTACTG CAACCAATCG CATCAAAACC ATTATGGAAG AAGAAGAAGC CCGCTGGGAA
TCCGCATTGA CCCAGCTGCG CATGAAAGTG CGTGAGCTCG AATCGCAGGA CCAGCAATAT
CTGCGTGAAA AGGACTTTTA CGAAGTGAAG GCGCCCATCA GCGGCACGAT CCAGCAACTG
AAAGGCCTGC AACCGGGCAG CATCGTGGCT GCCAACGAAT TGCTTGCCGA AATATCACCC
GATGAGGCGA TGTTGGCGGA AATGTACGTG CTGCCGAAGG ACATCGGCCT CATCCGAACC
GGCACGCAGG CGCGCTTGCA GGTGGATGCC TATAATTACA ACCAGTGGGG CCTGGTAACC
GGAGAGGTTA TTTCGATTTC CAATGACGTG TATACCAACG GGAAAGAGCC GCCATTCTTC
AAAGTCCGCT GTAAACTAGA CCAGAACGCG CTGACGCTGA AAAACGGCTA CGTGGGTAAG
CTCAAAAAGG GAATGACGCT CCAAGCGCGG TTCCTGGTTA CCGAACGGAC ATTGTTCCAG
CTGCTTTACG ACAAGGCCGA CGACTGGCTT AACCCCAACC TCATTGCGAC CACCGACACA
CCACCGCTGA ACTGA
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| Protein sequence | MNSNPQSEKN RIFPPEILEY TADYHFHRHH TRSGLVYQVM ILMTIIAFIG LFVIAVDVSV
KSTGIIRATD DRNAIKALVS GRLDSVFVSE NQRVRKGQTL LKIESGILRE QNQLVKAQKD
DYLNQIKDLN ILLHLSRTNN WSKKPGLSSG LYKQDFALFW QKIGDAKNTL VTVEKDFARS
KKLWDVRAIS EAEYDRAVLL HSTATNRIKT IMEEEEARWE SALTQLRMKV RELESQDQQY
LREKDFYEVK APISGTIQQL KGLQPGSIVA ANELLAEISP DEAMLAEMYV LPKDIGLIRT
GTQARLQVDA YNYNQWGLVT GEVISISNDV YTNGKEPPFF KVRCKLDQNA LTLKNGYVGK
LKKGMTLQAR FLVTERTLFQ LLYDKADDWL NPNLIATTDT PPLN
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