| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4897 |
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| Symbol | |
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| ID | 8228503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5919738 |
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| End bp | 5921051 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932746 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003089263 |
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| Protein GI | 255038642 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0861249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.15922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TTATTTTACT TTTCTGCCTC CTGCCTCTCC TCGGGCAGGC CCAGACCAGA
CTGAGCCTCG CCGAATGCGT GGACCTGCTG GCCAAAAACA ACCTCATTTA CCAGCAGGGC
ACATTGCAGG CGGAAGCGGC GCAGGCGCAG CTACGGCAGA CAAAGTCACA AATTCTTCCC
CAAATCTATA TTTCGGCCAA CCAGAGTCTT AACCTCGGCC GGAGCATTGA CCAGTACACC
AACGAGTATA TCGACCAGCT TTATACCTAT AACTCGGTGA GTACGGGATT CCAGTTACCC
GTTTACCAGG CCGGGCGACT TGCAAACCAG GCACGCCAGG GGACACTGCT CAAAGAGTCG
GCGATGGAAA ACCGCATTGC CGTGCTGAAT GCGCAAACGA TCCTGCTCAT GCAAGGCTAC
GTGAATGTAC TGGCAACCAA GGCATTGCTC GAAGCAGCCG ACCAGCAATT GGCTTCGTCG
CAGCAGCAGG TGGACAAGGT ACAGAGGCAG GTAGACGCCG GGACCGCCGG TAACAACCTT
CTTGCGGAGA TTAAAGCTCA GCTTTCCAAT GACAAATTTT TGCAGGTAAC GGCATTGAGC
AATTACCGTA CGGCGCGGCT CGCATTGTTC CAGCGGATGA ACATCACGCC CGACGACCAG
GTAGAGTTCG AACCGCTGCT GCCGAAGGAG AACATTACGC CCGCTGCGGC GGATGCCACG
GAATTGTATG ATCATGCTTC GAAAGCATTC CCGGAAATAC GCAGCGCCGA ACTGAACCGC
GAGAGTTTTA AGTACCTGGT GAAGTCGATT AAGGCATTGA ACTATCCGTC GCTGGACCTG
AACACCAATG TGCGTGCGTT TTACGCTTCC ACCAACAAGA ACCTTGATTA TTTCAACCAG
TTGAATGCGA CGCGGAATGG TTCTATCACG CTCGGCCTAA ACATCCCGAT CATGGGCCGC
TGGGTAACCC GGCCGCGTGT GGAACTGGCG AAAGTCCAGG AGCGCCAGGC CCAGAATACC
CTCGACATCG CCAACCAGCA ACTCCGCCAG GCGATCGAAG CCGCCGTGCT CAGCCTGAAC
ACCATGGCCG ACAAATACGC GGCGGCCGAA GGGCAGGTAG AATCACTGGG AGCGGCATTT
GCGGTGGTCG AGAGCAAGTT CAACGCCGGT GTCTCGAGTA TTTTCGAATA CACACTCTCG
AAGGCCAAGC TGGCACAAGC CCAGGGCACC GCCATTCAGG CGAAATATGA CTATCTGATG
CAACAAAGAC TGTTACAATA TTACCGCCAG GGCAACTGGC AGGGGATTTT TTAG
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| Protein sequence | MKRIILLFCL LPLLGQAQTR LSLAECVDLL AKNNLIYQQG TLQAEAAQAQ LRQTKSQILP
QIYISANQSL NLGRSIDQYT NEYIDQLYTY NSVSTGFQLP VYQAGRLANQ ARQGTLLKES
AMENRIAVLN AQTILLMQGY VNVLATKALL EAADQQLASS QQQVDKVQRQ VDAGTAGNNL
LAEIKAQLSN DKFLQVTALS NYRTARLALF QRMNITPDDQ VEFEPLLPKE NITPAAADAT
ELYDHASKAF PEIRSAELNR ESFKYLVKSI KALNYPSLDL NTNVRAFYAS TNKNLDYFNQ
LNATRNGSIT LGLNIPIMGR WVTRPRVELA KVQERQAQNT LDIANQQLRQ AIEAAVLSLN
TMADKYAAAE GQVESLGAAF AVVESKFNAG VSSIFEYTLS KAKLAQAQGT AIQAKYDYLM
QQRLLQYYRQ GNWQGIF
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