Gene Dfer_4887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4887 
Symbol 
ID8228493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5910300 
End bp5910980 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID644932736 
Productprotein of unknown function DUF1361 
Protein accessionYP_003089253 
Protein GI255038632 
COG category[S] Function unknown 
COG ID[COG4330] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.199245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.294842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAA ACCTGGTCAA CTATCTGGAA GGCAATTTGA AAGTTGCGCT CCTTGCATTT 
GTTTCTGCCG CTGCAATGGC ATTATTGTCA GTCAGGATTC TCCTGGAAAG CTGGCATTTC
GTTTTTCTTG CCTGGAACCT CTTTCTGGCC TGGGTGCCGC TGCTGTTTAT CAAATGGGTT
TGGGAAATGG AGAAGCGCCG GCCTGCGCCG TTCGGTATCT TGATGATTTA CCTGACGGTA
TGGTTGCTAT TTTTCCCTAA TGCGCCTTAT ATCATTACCG ACCTGAAACA TTTGCGCGGT
GTGCCCGAAA ATATGATCTG GTACGACGCA TTGATGATTT TTACATTCTC ACTCGCGGGA
TTTATGACCG GCCTATACAG CATCCGCATC GTGCACCGGA TCATCGCCCA CCGCTGGAAC
GAGCGCCTGG CATGGTTCGC GATCCTGAAC TCGATGATCC TGAGCGGATT CGGGATATTT
CTGGGACGCT ACGGACGCTG GAACAGCTGG GACATTATCA CGCAGCCCGG CGCGCTCGCC
AAAGGCATTT ACCGCAGCCT GCACGACCCG CTGGCGATCA AACACACCAT TACGTTTTCG
TTCGTGCTCA TGTTGTTGTA CTTTGCGTTC CATATTTTTG CCGAACTGAA ACAACATGAA
CGGACCCATC GATATTCTTA A
 
Protein sequence
MLRNLVNYLE GNLKVALLAF VSAAAMALLS VRILLESWHF VFLAWNLFLA WVPLLFIKWV 
WEMEKRRPAP FGILMIYLTV WLLFFPNAPY IITDLKHLRG VPENMIWYDA LMIFTFSLAG
FMTGLYSIRI VHRIIAHRWN ERLAWFAILN SMILSGFGIF LGRYGRWNSW DIITQPGALA
KGIYRSLHDP LAIKHTITFS FVLMLLYFAF HIFAELKQHE RTHRYS