Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4885 |
Symbol | |
ID | 8228491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5908591 |
End bp | 5909244 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644932734 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003089251 |
Protein GI | 255038630 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.527569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0758496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA GAATCAGTCT GTGGGTTTCG ATGATTTTAT GCCTGTCGTT GCTGGCGGGC CCGGCCTCGG CGGAAGATGG CGAGCGGGGA GCGAGCAGGC AATCCCAGAG AGGTTATCAG GTAGGCGATG CGGTGTCTAA TTTCCGTTTG AAAAACACCA ACGGAAATAT GGTGTCGCTC TCGGATTTTG CCAGTTCCAA AGGTGTAATC GTCGTTTTTA CCAGTAACCA TTGCCCGTTC GCGAAGGCCT ACGAGGACAG GATCATTGCT CTGAACAACA AATTCGCAGG CCAGGGCTTT CCGGTGATCG CCATCAACCC GAGCGATCCG GGAACGCACC AGGACGATAC ATTTGAAAAA ATGAAGGAGC GGGCTGCTGC CAAAAATTAC GGTTATCCTT ATCTTGTCGA CGACGCACAG CAGGTAGCCC GGGCATTCGG GGCCGCGCGC ACGCCGCAGG CATTTGTGTT GCAGAAAAAC GGTGCGCAGT TTGCCGTGCG GTACGTGGGC ATGATCGACG ACAACCCGCA GGATGCTTCC GGCGTCACCA AGTTTTATGT GGACGAGGCC GTGACCAACC TGGCCGGCGG GAAGCCGGTC GTGACAACGC TCACCAAACC CGTGGGCTGC GCCATCAAGT GGAAAAACCA GTGA
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Protein sequence | MKIRISLWVS MILCLSLLAG PASAEDGERG ASRQSQRGYQ VGDAVSNFRL KNTNGNMVSL SDFASSKGVI VVFTSNHCPF AKAYEDRIIA LNNKFAGQGF PVIAINPSDP GTHQDDTFEK MKERAAAKNY GYPYLVDDAQ QVARAFGAAR TPQAFVLQKN GAQFAVRYVG MIDDNPQDAS GVTKFYVDEA VTNLAGGKPV VTTLTKPVGC AIKWKNQ
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