| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4877 |
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| Symbol | |
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| ID | 8228483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5899170 |
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| End bp | 5900396 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932726 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089243 |
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| Protein GI | 255038622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.651976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.3274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT CCTACCGGAT TGCCGTTCGC TACTTTTTTT CGCGTAACAA ACGGAGTTTC
ATCAGTCTGA TCGCGCGCAT TGCCATGGCC GGCGTGGCGG TCGGGACGAT GGCTATGGTG
GTGGTATTGT CTGTGTTCAA TGGAATGGAA GATCTTAACC GTAAGATTTT CAAGACATTC
GACTCGGATG TGCGCATTAC GCCTGCGGAA GGCAAGCGCT TCAAGGTCAC GCCGGGCATG
CTGCAAGCGG TGCAGACTGT GCAGGGCGTG AAACTCGTGA CGCAGGTGAT CGAAGACAAT
GCGCTGGCCC GCTACGGCAA CCAGCAAACC ATTATCCGGC TGAAAGGCGT GGATAGCACT
TTTGAAAAGC AAAAGCAGCT CGACACGGCG ATGGTGGAAG GCACACTTCG GCTGATCGGC
GACAATGGAA CGCCCTACGC CATTATTGCC GAGGGTGTGC GGAATGCATT GTCGATTTCA
CTCGAAGACA TATTCACGCC GCTGGAACTG CTTTATCCGC GCACGGGCAC GAGAACGCTC
AACCTGACAT CGCCGGAGGC ATTCAACCAG CTCAATCTGC GCCCGGGGGG TATTTTTTTT
ATTGAAAACC GCTACGACGA CTACATCATC GCGCCATTGA AGCAGGTGGA AGGGCTGATG
GGCTACAATC AGGAGCGCTC CGCCCTGGAA GTGTACCTGC GGCCCGGCTA TGCGGAAAAA
GACGTGAGCG ACCAGATCGG CGCAAAGCTC GGAAAAGCAT TTGTGGTAAA AGACCGCGAC
TCGTTGAATG CCGATTTGCT CCGTGCGATA AAAATGGAAA AGCTTTTTGT GGCAGTGACC
CTTTCGCTGA TTATTTTAGT GGCTGCAATC AATATCTTTT TCTCACTCAG CATGTTAGCG
ATCGAGAAAA AGAACGATGT GTCGATGCTC TTCGCAATGG GCGCCACGCA GTCGCTGATC
CGCCGGATTT TCATCGCCGA AGGTGCTATC GTGGCGTTTT CGGGCGCTAT TGCTGGGCTT
TTGGGCGGGA TCGGGATTTG CTGGTTGCAA ATGCGGTACG GCCTGGTGTC GATGGGCATG
ACCACCTCGC TGGTAGATGC CTATCCGGTT AAATTAATTT GGGAAGACAT ACTCTACACA
GGCGTGATTG TCGTTATGAT AACTATGGTT GTTTCGTACA TCCCGGCCAG AAGGGCCGCA
GCAGCCGGTG CGCTACTGCG GGTGTAG
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| Protein sequence | MDISYRIAVR YFFSRNKRSF ISLIARIAMA GVAVGTMAMV VVLSVFNGME DLNRKIFKTF
DSDVRITPAE GKRFKVTPGM LQAVQTVQGV KLVTQVIEDN ALARYGNQQT IIRLKGVDST
FEKQKQLDTA MVEGTLRLIG DNGTPYAIIA EGVRNALSIS LEDIFTPLEL LYPRTGTRTL
NLTSPEAFNQ LNLRPGGIFF IENRYDDYII APLKQVEGLM GYNQERSALE VYLRPGYAEK
DVSDQIGAKL GKAFVVKDRD SLNADLLRAI KMEKLFVAVT LSLIILVAAI NIFFSLSMLA
IEKKNDVSML FAMGATQSLI RRIFIAEGAI VAFSGAIAGL LGGIGICWLQ MRYGLVSMGM
TTSLVDAYPV KLIWEDILYT GVIVVMITMV VSYIPARRAA AAGALLRV
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