Gene Dfer_4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4876 
Symbol 
ID8228482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5898769 
End bp5899152 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content52% 
IMG OID644932725 
Productribosome-binding factor A 
Protein accessionYP_003089242 
Protein GI255038621 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.26776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCA AAAGACAACA AAAAGTAGGC AGACAGATAC AAAAGGACCT GGGGGAAATA 
TTCCAGAAAG ATGCGCAGCA CCTTACCCAT GGCTCGTTTG TAACGATCAC TGCCGTACGG
GTCACGCCCG ATTTGAGCAT CGCCAGGGCT TACCTGAGCT TTTTGCCCGA TAAAAATAAA
ACCATGCTGC TGGAAACGAT CCGGGAAAAT ACCCGATTCA TCCGCCAGAA ACTCGCCGAA
CGCGTCCGTC ACCAGCTGAG GATCGTTCCG CACCTGCAAT TTTATATCGA CGACACGGCC
GAATACGCAG CCAAAATGGA TCAGTTGTTT GCGGACCTGG TGATCCCGCC CGCACAGCCC
GACGAGGAGG AAGATACCTA CTGA
 
Protein sequence
MESKRQQKVG RQIQKDLGEI FQKDAQHLTH GSFVTITAVR VTPDLSIARA YLSFLPDKNK 
TMLLETIREN TRFIRQKLAE RVRHQLRIVP HLQFYIDDTA EYAAKMDQLF ADLVIPPAQP
DEEEDTY