Gene Dfer_4873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4873 
Symbol 
ID8228479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5895902 
End bp5896636 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID644932722 
Producthypothetical protein 
Protein accessionYP_003089239 
Protein GI255038618 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.626213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTTT CTCTCCTCAA CCCGGCCGTT CCCGAGGATG AGAAGAGGAT CAAGGAGGCG 
TTTGAAGACC GCAACTGGAA CGAGATCAAG AGTGCCGATT CGTGGGTTGT TTTCAAGGTA
ATGGCCGAAT TTGTGGAAGG ATTTGATAAA CTGGCCAAAA TCGGCCCGTG CGTTTCCATT
TTCGGTTCTG CCCGTACTTT GCCCGACAAC CCTTACTATA AAACCGCGGA AGACATTGCC
GCCAAACTCG TGCGCCACGG ATATGGCGTG ATCACCGGCG GCGGGCCGGG TATCATGGAA
GCCGGTAACA AAGGGGCTTT CGAACAAGGC GGAAAGTCGG TCGGATTGAA TATAAAACTG
CCGTTTGAAC AGCACAGCAA CCTTTACATC GACCACGACA AGAGCATCAA TTTCGACTTC
TTTTTCGTGC GGAAAGTCAT GTTTGTCAAA TACTCGCAGG GCTTCATCGT GATGCCCGGC
GGATTCGGCA CGCTCGACGA GCTATTTGAG GCGATGACGC TCATCCAAAC CAAAAAAATC
GGCCGCTTCC CGATCGTGCT CGTGGGCAGC ACCTACTGGT CGGGCCTGCT CGACTGGATC
AAAGGGACTA TGCTCACCGA ACACAATATC AATCCGGAAG ACCTGAAACT GATCAGCATA
GTAGACACGC CCGACGAGGC CGTAAAAGTG ATCGACACAT TCTACTCGAA ATACCTGCTG
AAACCCAACT TCTAG
 
Protein sequence
MDVSLLNPAV PEDEKRIKEA FEDRNWNEIK SADSWVVFKV MAEFVEGFDK LAKIGPCVSI 
FGSARTLPDN PYYKTAEDIA AKLVRHGYGV ITGGGPGIME AGNKGAFEQG GKSVGLNIKL
PFEQHSNLYI DHDKSINFDF FFVRKVMFVK YSQGFIVMPG GFGTLDELFE AMTLIQTKKI
GRFPIVLVGS TYWSGLLDWI KGTMLTEHNI NPEDLKLISI VDTPDEAVKV IDTFYSKYLL
KPNF