Gene Dfer_4867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4867 
Symbol 
ID8228473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5889500 
End bp5891473 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content49% 
IMG OID644932716 
Producthypothetical protein 
Protein accessionYP_003089233 
Protein GI255038612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.863369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TTACGTTTCT CTTTACCCTT TTACTCTTAA CCCTGGGCTT CGCCTTCCAG 
GCCAGCGCAA CGAGTTATTG CGATTGCGAG AACAATAAGC TTAACAATGG CGGCTTCGAA
AGCGGGACTA ACGGCTGGAC AACGGTCTTC GGAAGCTTCG GAACCAACGA CTATTACAAG
ATGTGTGGTT GGAAAGGCGG TGTCATTGGC GATAACAAGG ACAACGCGGC AAAGATTTAT
CAGGATGTTA ACATCACCGG CGGTAGCGAA GTAACGCTCA CCGTATATGG TGGTACGCAC
AAGAGCCGGT ACGACCATAC ATTCTCACTG ATCTTCCTCG ACTCCAACGG CAATCCTGTG
GGTGATGCGG TGGTTAAGCA GGTAGATTAC GTGGTTAATA ACAGTAATTT GCAGAAGTAT
ACGCTCGTCG GAACGGCACC GTCCAATGCG GTGAAAGTTC GTTTCCAGGC TTACGCGCAA
AAAGATTATC TGAAAATTGA CGCGGCATGT ATGAAGGTGA AGACTAAAAC ACCTGTAAGC
TGCGAGTGCG TTGAAAACAA CCAGTATATC AAGAATGCAA GCTTCGAAAA CGGCACGGCT
GACTGGCAAT GGGTTCCAGG ACAGTCACAG GCTACATTCA CGAAGGACGA AGGCTACAAC
ATGTGCGGTG ATAAGAATGG TTTGCTCTAC AAAAAAGGAA AAATCTATCA GGACATTTCC
TTGGTGCCGG GTTCATCCAT TCAGATCAGC GCCTACGGCG GTACCCATAC GAACGACAAT
TGGAACAGAC ATTATTTCAA AATCACTTTC TACGACGGAC AAGGTAACTT GCTGGGTGAT
TCATCCCGCG TGCTCATGGA TCACATCGTA GGTAGCGACA AGCAACTGAA AAAATTCGAT
CTGTCCGCAA CTGCCCCTGC GGGTTCGGTA AAGGCACGTT TCACGGTTGA GTCAACCGGC
GATTATTTCA AGGTAGATGC GATTTGTACG ACTGTAACGC AGCCTATTAC CTGTCTGGAA
TGTAATGGCA ACACGCTCAA AAACGCGAGC TTCGAGGATG GTACGAACAA CTGGAGCGTA
ACCGGTACAT TGTCGGTAGA TGCGCTGTAC GCTGTGTGCG GTTCGAAAGG TGCCAAACTG
ACCGGCGCGG GCAAGTTCTG GCAGGATGTG GAAGTTCAAA CGACTTTCGG AAGCCAGGTG
AGCCTTACCA TCTATGGCGC ATTCGACAAT GCCAATAGCC AGGTTTTCCA ACTATTGTTC
CTGGATGAAA CCCAGTCGGA AATCGGCCAG GTAACCAAAG AGGTGACCAA ATCGCTGACG
ACAAGCCCGT GGGGCCTTGA AAAATATACA TTGTCCGGAA CGCTTCCGAG CAATACCAAA
TACGTTCGCG TGCTTGCATC ATCGGCCGGT GGAACATTTG TGGCAGACAA TGCATGTCTC
GTATTCTCGG GCCCTCCATT GCCTGTAACA CTGTCGGCAT TCTCTGCAAA AAAAGAAGGT
GCTACCGCGC AACTGACCTG GGCAACTACT TACGAAACCA ACTCGGCTTA CTTCGAAGTG
CAGCACAGCC AGGACGGCAA GAAATGGACG GCGCTGACGC AACTGGATGC CAAAGGCGAA
AGCAAGCAGC TTGAAACTTA CACTTATACG CACACCAATC CATTTGCCGT GAACCTGTAT
CGCCTGAAAA TGGTGGATCT TGACGAAACT TTCGCTTACA GCGCGATCAA GAGCCTGAAT
TTCGATGGCC AGGAGCAAAT GAACGTTTAT CCGAACCCGA CTGTGGATCG TATTAAAGTG
AGCAGCAACC AGCTCGTTAC CAATGTGAAA GTGTACAGCG CGAACGGTGT GCTGGTACTC
AACACGAAGC CTGATCCTGC CAGCGAAGTG GATCTGACGC GGCTTTCACA AGGCACGTAC
TTTGTGAAAA TCAATGACGG CCCGCTGATG CGCAAAATTC TGATCGTGAG GTAA
 
Protein sequence
MKNFTFLFTL LLLTLGFAFQ ASATSYCDCE NNKLNNGGFE SGTNGWTTVF GSFGTNDYYK 
MCGWKGGVIG DNKDNAAKIY QDVNITGGSE VTLTVYGGTH KSRYDHTFSL IFLDSNGNPV
GDAVVKQVDY VVNNSNLQKY TLVGTAPSNA VKVRFQAYAQ KDYLKIDAAC MKVKTKTPVS
CECVENNQYI KNASFENGTA DWQWVPGQSQ ATFTKDEGYN MCGDKNGLLY KKGKIYQDIS
LVPGSSIQIS AYGGTHTNDN WNRHYFKITF YDGQGNLLGD SSRVLMDHIV GSDKQLKKFD
LSATAPAGSV KARFTVESTG DYFKVDAICT TVTQPITCLE CNGNTLKNAS FEDGTNNWSV
TGTLSVDALY AVCGSKGAKL TGAGKFWQDV EVQTTFGSQV SLTIYGAFDN ANSQVFQLLF
LDETQSEIGQ VTKEVTKSLT TSPWGLEKYT LSGTLPSNTK YVRVLASSAG GTFVADNACL
VFSGPPLPVT LSAFSAKKEG ATAQLTWATT YETNSAYFEV QHSQDGKKWT ALTQLDAKGE
SKQLETYTYT HTNPFAVNLY RLKMVDLDET FAYSAIKSLN FDGQEQMNVY PNPTVDRIKV
SSNQLVTNVK VYSANGVLVL NTKPDPASEV DLTRLSQGTY FVKINDGPLM RKILIVR