Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4867 |
Symbol | |
ID | 8228473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5889500 |
End bp | 5891473 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644932716 |
Product | hypothetical protein |
Protein accession | YP_003089233 |
Protein GI | 255038612 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.863369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATT TTACGTTTCT CTTTACCCTT TTACTCTTAA CCCTGGGCTT CGCCTTCCAG GCCAGCGCAA CGAGTTATTG CGATTGCGAG AACAATAAGC TTAACAATGG CGGCTTCGAA AGCGGGACTA ACGGCTGGAC AACGGTCTTC GGAAGCTTCG GAACCAACGA CTATTACAAG ATGTGTGGTT GGAAAGGCGG TGTCATTGGC GATAACAAGG ACAACGCGGC AAAGATTTAT CAGGATGTTA ACATCACCGG CGGTAGCGAA GTAACGCTCA CCGTATATGG TGGTACGCAC AAGAGCCGGT ACGACCATAC ATTCTCACTG ATCTTCCTCG ACTCCAACGG CAATCCTGTG GGTGATGCGG TGGTTAAGCA GGTAGATTAC GTGGTTAATA ACAGTAATTT GCAGAAGTAT ACGCTCGTCG GAACGGCACC GTCCAATGCG GTGAAAGTTC GTTTCCAGGC TTACGCGCAA AAAGATTATC TGAAAATTGA CGCGGCATGT ATGAAGGTGA AGACTAAAAC ACCTGTAAGC TGCGAGTGCG TTGAAAACAA CCAGTATATC AAGAATGCAA GCTTCGAAAA CGGCACGGCT GACTGGCAAT GGGTTCCAGG ACAGTCACAG GCTACATTCA CGAAGGACGA AGGCTACAAC ATGTGCGGTG ATAAGAATGG TTTGCTCTAC AAAAAAGGAA AAATCTATCA GGACATTTCC TTGGTGCCGG GTTCATCCAT TCAGATCAGC GCCTACGGCG GTACCCATAC GAACGACAAT TGGAACAGAC ATTATTTCAA AATCACTTTC TACGACGGAC AAGGTAACTT GCTGGGTGAT TCATCCCGCG TGCTCATGGA TCACATCGTA GGTAGCGACA AGCAACTGAA AAAATTCGAT CTGTCCGCAA CTGCCCCTGC GGGTTCGGTA AAGGCACGTT TCACGGTTGA GTCAACCGGC GATTATTTCA AGGTAGATGC GATTTGTACG ACTGTAACGC AGCCTATTAC CTGTCTGGAA TGTAATGGCA ACACGCTCAA AAACGCGAGC TTCGAGGATG GTACGAACAA CTGGAGCGTA ACCGGTACAT TGTCGGTAGA TGCGCTGTAC GCTGTGTGCG GTTCGAAAGG TGCCAAACTG ACCGGCGCGG GCAAGTTCTG GCAGGATGTG GAAGTTCAAA CGACTTTCGG AAGCCAGGTG AGCCTTACCA TCTATGGCGC ATTCGACAAT GCCAATAGCC AGGTTTTCCA ACTATTGTTC CTGGATGAAA CCCAGTCGGA AATCGGCCAG GTAACCAAAG AGGTGACCAA ATCGCTGACG ACAAGCCCGT GGGGCCTTGA AAAATATACA TTGTCCGGAA CGCTTCCGAG CAATACCAAA TACGTTCGCG TGCTTGCATC ATCGGCCGGT GGAACATTTG TGGCAGACAA TGCATGTCTC GTATTCTCGG GCCCTCCATT GCCTGTAACA CTGTCGGCAT TCTCTGCAAA AAAAGAAGGT GCTACCGCGC AACTGACCTG GGCAACTACT TACGAAACCA ACTCGGCTTA CTTCGAAGTG CAGCACAGCC AGGACGGCAA GAAATGGACG GCGCTGACGC AACTGGATGC CAAAGGCGAA AGCAAGCAGC TTGAAACTTA CACTTATACG CACACCAATC CATTTGCCGT GAACCTGTAT CGCCTGAAAA TGGTGGATCT TGACGAAACT TTCGCTTACA GCGCGATCAA GAGCCTGAAT TTCGATGGCC AGGAGCAAAT GAACGTTTAT CCGAACCCGA CTGTGGATCG TATTAAAGTG AGCAGCAACC AGCTCGTTAC CAATGTGAAA GTGTACAGCG CGAACGGTGT GCTGGTACTC AACACGAAGC CTGATCCTGC CAGCGAAGTG GATCTGACGC GGCTTTCACA AGGCACGTAC TTTGTGAAAA TCAATGACGG CCCGCTGATG CGCAAAATTC TGATCGTGAG GTAA
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Protein sequence | MKNFTFLFTL LLLTLGFAFQ ASATSYCDCE NNKLNNGGFE SGTNGWTTVF GSFGTNDYYK MCGWKGGVIG DNKDNAAKIY QDVNITGGSE VTLTVYGGTH KSRYDHTFSL IFLDSNGNPV GDAVVKQVDY VVNNSNLQKY TLVGTAPSNA VKVRFQAYAQ KDYLKIDAAC MKVKTKTPVS CECVENNQYI KNASFENGTA DWQWVPGQSQ ATFTKDEGYN MCGDKNGLLY KKGKIYQDIS LVPGSSIQIS AYGGTHTNDN WNRHYFKITF YDGQGNLLGD SSRVLMDHIV GSDKQLKKFD LSATAPAGSV KARFTVESTG DYFKVDAICT TVTQPITCLE CNGNTLKNAS FEDGTNNWSV TGTLSVDALY AVCGSKGAKL TGAGKFWQDV EVQTTFGSQV SLTIYGAFDN ANSQVFQLLF LDETQSEIGQ VTKEVTKSLT TSPWGLEKYT LSGTLPSNTK YVRVLASSAG GTFVADNACL VFSGPPLPVT LSAFSAKKEG ATAQLTWATT YETNSAYFEV QHSQDGKKWT ALTQLDAKGE SKQLETYTYT HTNPFAVNLY RLKMVDLDET FAYSAIKSLN FDGQEQMNVY PNPTVDRIKV SSNQLVTNVK VYSANGVLVL NTKPDPASEV DLTRLSQGTY FVKINDGPLM RKILIVR
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