| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4861 |
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| Symbol | |
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| ID | 8228467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5881463 |
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| End bp | 5883859 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932710 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089227 |
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| Protein GI | 255038606 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.218839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAA ATTACCTCAA AATCGCCCTC CGGAACATCT GGAAGAACAA GGCTTTTTCG
GCCATTAACA TCGTTGGACT TGCGGTAGGA ATGGCTGCCT GCATTGTGAT TATGCTGTTC
GTTTCGTACG AGCGCAGCTT CGATCGGATG CATTCAAAGC ATATTTTCCG GCTCAACGAA
GTGCAGACGT TCGACGGCAT GACTTCACAG AATGTCGCAT TGAGCATGTA CCCGATGGGG
CCGACGTTGA AACAGGAATT TTCGGAGGTC AAAAGCTTTG TGCGGATCAA CGGAACGGGG
AAAATGCCGG TTTTTTACAA TGGTAAGCGG GTGGAGCTGA ACCAGTCGTT CCTGACCGAC
CCGGATTTTT TCAGCATGTT TGATTTCAAA CTCGAAGAGG GTGACAGCCG TAAAGTGCTG
ACTGAGCCGA ATTCGGTGGT ACTCACGCGC ACGACCGTTT CCAAACTGTT CGGCAATGAG
GACGCGATAG GCCGGAATAT CCACCTTTAC GCCAACGACA CCCTCACGCT CAAAGTGACG
GGGATTATGG AGGATGTGCC GGGCAACTCG CATTTGCAGT TTGATGCGCT GGTATCGTTC
AATACCATCG CCAAGCCCGA TTTCATGGAA AACTGGGGAA GTAATTACCT CAATACTTAC
CTCGAACTGG CCGCGCAAAC GGACGTGGCA GCTCTGGAAA AGAAGTTTCC GGCTTACCTC
AAAAGGCACA TGAAGGACGA GCACTGGAAG CATTTCAAGC TCTTCTTGCA GCCGTTAAAG
GACATCCACG CCGGCTCTAC GGACATTACC CATGATTACA TCAACTTCCA GAAGTTCGAC
GTCCGGTACA CCTATGTATT TTCAATCATC GCGGCGATTG TGCTCATTAT CGCCTGTGTG
AACTTCATGA ACCTGTCCAC CGCCCGCTCT GCCGCACGTG CGAAAGAGGT GGGCATTCGC
AAGTCGATAG GGGCGAGGCG GGCCGAACTG GCGAGGCAAT TTATCGGCGA ATCGGTGCTG
CTGGCATTGC TCGCGCTGGT GCTTGCGGCG GGGATCGTTT GGCTGGTGAT GCCGGCAGTG
GCGAATTTCA GCCGGCGGCC GCTGGATTTT TCCTTTATCG AAAATCCGTT GCTGCTGCCG
GTGCTGCTTA CGGGAACCGT GCTGATCGGT ATTGCTTCGG GCGTTTATCC GGCATTCTTC
CTCTCGGCCT ATGAGCCTGT GAAGGTGCTC AAAGGTTTGG TGCGTTCGGG CAAAAGCAGT
TTCAGGAATG CCCTCGTGGT TGCGCAGTTT TCAAGCGCCG TGTTCCTGAT CATCGCTACG
GCATTTGCCG TAAAGCAATT GAACTACATG CTGGACAAGC ATCCGGGATT TGAGAAGGAC
CAGGTGGTCG TTATTCCGCT GGATTCGCGG TCGGATACGA AATATGAGGC ATTGAAACGG
GAAATGCTGC GCAGCGCATT TGTCGGAAAT GTCACCGGTT CGCAGCAGCG GCTGGGTAAT
AACCTGCACC AAACGGCTGT CAATTTTCAG GGAACGGGCG CCAAAAGGGA GCTCACCTCG
TCGCAAATCA TTGTCGATCC CGACTTTTTA AGCCTTTATC AAATTAAACT GATCGCAGGT
CGTGACTTTA CCGATAACCC GGCCGATAAC GGGAAAACCT ACATCATTAA CAAAGCATTG
GCCAAAGAGC TGCTCCTGAA AGAGCCGACG CTCACGATGG AAACACTGAT CGGCAAACGC
TTCGGTTTCT ACGGAATGGA TTCGTTGTCG AGCATTGTGG GTGTGGTGGA GGATTTCAAC
TTCAACTCTT TGCACCACCA AATCGAACCT TTGTGCATTT TCAACCAGAA AGACTGGATG
TACTCCGAAA TGTCGGTGCG GATCAAAGGG AAGGATGCCC GGCAGGCAGT TACGGCCATG
CAGGCTGCGT GGAGCAAGAT CCTTCCGCAG GAGCCCTTTA GGTACTCTTT CCTGGACGAG
CATTTCGCGG AAATGTACCG GGCCGATAGC CAGGTGAGCG AAATCGTAGG CATTCTGGCG
GGACTTGCGG TGTTTATTTC GTGCCTCGGA CTGTTTGGGC TGGCGTCGTA TTCGGCCGAG
CGGAGGATCA AGGAAATCGG GGTGCGAAAG GTCATGGGCG CCTCGGTAGC GGGCATTGTG
GCATTGCTCT CGCGTGATTT TCTCAAACTC GTGCTCCTGG CCATTCTGAT CGCCTCGCCA
CTCGCTTGGT TTGCCGTGCG GGCCTGGCTG AAAGATTTCG CCTATCGCAT CGACATCGAG
TGGTGGATGT TCCTGCTGGC GGGCGTGCTG GCCGTGCTGG TAGCATTGCT CACGGTGAGT
TTCCAGAGTA TCAAAGCGGC GCTCATGAAC CCCGTTAATT CGCTCAGGAC CGATTAG
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| Protein sequence | MLRNYLKIAL RNIWKNKAFS AINIVGLAVG MAACIVIMLF VSYERSFDRM HSKHIFRLNE
VQTFDGMTSQ NVALSMYPMG PTLKQEFSEV KSFVRINGTG KMPVFYNGKR VELNQSFLTD
PDFFSMFDFK LEEGDSRKVL TEPNSVVLTR TTVSKLFGNE DAIGRNIHLY ANDTLTLKVT
GIMEDVPGNS HLQFDALVSF NTIAKPDFME NWGSNYLNTY LELAAQTDVA ALEKKFPAYL
KRHMKDEHWK HFKLFLQPLK DIHAGSTDIT HDYINFQKFD VRYTYVFSII AAIVLIIACV
NFMNLSTARS AARAKEVGIR KSIGARRAEL ARQFIGESVL LALLALVLAA GIVWLVMPAV
ANFSRRPLDF SFIENPLLLP VLLTGTVLIG IASGVYPAFF LSAYEPVKVL KGLVRSGKSS
FRNALVVAQF SSAVFLIIAT AFAVKQLNYM LDKHPGFEKD QVVVIPLDSR SDTKYEALKR
EMLRSAFVGN VTGSQQRLGN NLHQTAVNFQ GTGAKRELTS SQIIVDPDFL SLYQIKLIAG
RDFTDNPADN GKTYIINKAL AKELLLKEPT LTMETLIGKR FGFYGMDSLS SIVGVVEDFN
FNSLHHQIEP LCIFNQKDWM YSEMSVRIKG KDARQAVTAM QAAWSKILPQ EPFRYSFLDE
HFAEMYRADS QVSEIVGILA GLAVFISCLG LFGLASYSAE RRIKEIGVRK VMGASVAGIV
ALLSRDFLKL VLLAILIASP LAWFAVRAWL KDFAYRIDIE WWMFLLAGVL AVLVALLTVS
FQSIKAALMN PVNSLRTD
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