| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4859 |
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| Symbol | |
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| ID | 8228465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5877147 |
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| End bp | 5879525 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932708 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089225 |
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| Protein GI | 255038604 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0508357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGCA GCTACTTAAA ATTTACGCTT CGCAGCCTGT TGAAAAACAG GGTGTACACG
GGAATCAACC TCGCAGGCCT GGCTGTGGGC ATGGCAGGTG CAATCGTGAT CTTTCAGCTG
GTGAAGCACC ACCTGTCCAC CGACCGTTAC CATCAGAATG CCGCGCGTAC CTACCGGGTA
GTGGTGGACC TGCACCTGGA CGACGGCTCG GTGGAGCAGG AGCGCGGTTC GGCTTTTGTT
TTGCACGAAA CATTGAAAAA GGATTTCAGC TCAGTCGGGA ATGCTGCTTA CGTGGCGCGC
AAAGAAGTTA CGATACGCGT TGATAGCGGC GGGGCTTCGA GGAAGTTCCT GGAAAAGGAC
CTGGTTTTTA CCAATGCTGA TTACTTCAAA ATATTCGACT ATCAATGGAT CAGCGGGAAT
GCCTCGGCGA TGTCCGCACC GAACCAGGCG ATTGTGACGG AGCGTTATGC CCGGAAATAT
TTCGGGAATG GCCAGGCATT GGGCAAAGTG ATCCGTGCCG ATAACCGCGA AAACCTCGTG
ATTGCAGGCA TTGTAGCCGA CTATCCCGCG CAAACCGATT TTCGTTATGA TATTTTTGTT
TCGCTCCCAA CCATCCGAAA GATCGTTCCC GAGTATGGCT ACGAAGACTG GGGCTGGATT
GACAGCAACC GTGAAACCTA CATTACACTC CGGTCGCCGG ACGATAAGGC GGCATTCGAG
GCACAGATGC CGGCGTTCGC GCAGAAATAT TACGGTCCCG ACGACCGGGT GTTCCATTAC
CGTTTGCAGG ACCTGTCCGA TGTGCATTTT AATGTCGCAT ATGGCGGGAA AATCAAGTAT
AACACCATCA TTGTCCTCGC AACGGTGGGC ATTTTGCTCG TTCTCATCGC GTGTTTCAAC
TTCATTAACC TATCCACGGC CCAGGCATTC AAGCGCAGCA AGGAAGTGGG CGTGAGAAAA
GTGCTCGGCG TATCGCAGGC GCAGGTATTC TGGCTGTTTA TCCAGGAAAC CGCATTGCTG
ACTGTCGTCG CCGGAGCGGC ATCCATTGGC ATAGCCTGGC TTTTTGCGCC GGTACTGAGC
CGGTGGCTCG GACTAGGTCT ACGGGTGAAT GTGCTGACAG ATCCGCTATT GATGGTATTT
TTTGCCGCGC TGCTGCTTTT TGTAATCGTG CTCGCGGGTA TTTATCCGGC ATTCGTCATT
TCAAATTTCA ATCCCGTAAA GGCGATCAAA GGCTTGCTGA AAGATCATAA CCGCAGCTTT
TTCTCCGTCA GAAAAGGGCT TGTGGTGACG CAGTTCAGCA TTTCGTTTGT CCTGATCGCC
GTTTCTACAC TGATATTCCT GCAATCCGAA TTTTTGAAAA ACAAGGATTT GGGCGTCGAC
AAAAATCTGG TGCTGCATTT GAACCTGCCG GAAGCCGAAA CAAGCAAGCT ATCGGCATTG
CGCAATGAGC TGGCGGCATT GCCGGAAGTA GCGGAACTGT CGTTCTTCCG CAGCGCGCCA
TCGGTGCAGA CGAGCGGCGG CGGCACCATT AAGTTCGAAA ACCGTGACTG GGAGAAATTC
GTGGCACGTT CCAGGGCAGC GGATGCGCAT TTTGTAAAAA CCTACGGCCT GAAACTGGTC
GCAGGACGGG CTCCGGCGCA TTCGGACACG CTCAATGAAC TGCTGATCAA CCGGAAACTG
GTGAAAGCAC TCGGCCTGAA ATCGCCCGAA GATGCATTGA ACCGGCGTTT GCACGTGGGC
GATGCGGGTA AAACGGGCAC TATCGTGGGC GTGCTGTCGG ATTTTAACAA TGGCGACCTC
TACACCGGCA TCGAGCCGAC GATCGTCTAT GCCGACCAGA AGCGCTACCG CCGGGCGGGC
GTCAAGCTCA GGCTTATCAG CGCGCCTACC ATCCCGCGGA TCGCCGCCGT TTGGCAAAAA
CACTTCCCTG AAAATGTTTT CGAGTATACT TTCTACGACG AAGAGATAGC GGCATTCTAC
CAGCGCGAGG AACTCGCGAC GCGCCTGACG ACCACTTTTG CATTGCTGTC GGTTTGCCTT
TCATGCCTGG GATTGTTCGG GCTCGCCATT TTCGCAATTG AACAGCGCAC AAAGGAAATA
GGCATCCGCA AAGTGCTGGG GGCTTCGGTG GCGGGCATTA CGGCCATGCT GTCGATGGAC
TTTCTGAAAC TGGTGATCGT CGCGATTGTG GTGGCGAGCC CGGTAGCCTG GTATTTTATG
GAGCGCTGGT TGCAGGACTT TGCATACCGC GTGCCGGTCC ATTGGGGCAT CTTCGTTTGG
GCAGGCGCGC TGGCTGCAGG CATTGCCCTG GCGACCGTCA GTTTCCAAAG CATCCGCGCC
GCATTGACCG ACCCCGTGAA GAGTTTGAAA AATGAATAG
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| Protein sequence | MIGSYLKFTL RSLLKNRVYT GINLAGLAVG MAGAIVIFQL VKHHLSTDRY HQNAARTYRV
VVDLHLDDGS VEQERGSAFV LHETLKKDFS SVGNAAYVAR KEVTIRVDSG GASRKFLEKD
LVFTNADYFK IFDYQWISGN ASAMSAPNQA IVTERYARKY FGNGQALGKV IRADNRENLV
IAGIVADYPA QTDFRYDIFV SLPTIRKIVP EYGYEDWGWI DSNRETYITL RSPDDKAAFE
AQMPAFAQKY YGPDDRVFHY RLQDLSDVHF NVAYGGKIKY NTIIVLATVG ILLVLIACFN
FINLSTAQAF KRSKEVGVRK VLGVSQAQVF WLFIQETALL TVVAGAASIG IAWLFAPVLS
RWLGLGLRVN VLTDPLLMVF FAALLLFVIV LAGIYPAFVI SNFNPVKAIK GLLKDHNRSF
FSVRKGLVVT QFSISFVLIA VSTLIFLQSE FLKNKDLGVD KNLVLHLNLP EAETSKLSAL
RNELAALPEV AELSFFRSAP SVQTSGGGTI KFENRDWEKF VARSRAADAH FVKTYGLKLV
AGRAPAHSDT LNELLINRKL VKALGLKSPE DALNRRLHVG DAGKTGTIVG VLSDFNNGDL
YTGIEPTIVY ADQKRYRRAG VKLRLISAPT IPRIAAVWQK HFPENVFEYT FYDEEIAAFY
QREELATRLT TTFALLSVCL SCLGLFGLAI FAIEQRTKEI GIRKVLGASV AGITAMLSMD
FLKLVIVAIV VASPVAWYFM ERWLQDFAYR VPVHWGIFVW AGALAAGIAL ATVSFQSIRA
ALTDPVKSLK NE
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