Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4849 |
Symbol | |
ID | 8228455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5862008 |
End bp | 5864416 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644932698 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003089215 |
Protein GI | 255038594 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.011256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.10572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA ATTATCTAAC GACTTCATTC AGAAACCTTC GGCGTAACTG GAATTTTACG CTGATCAACA TCACCGGCCT GACCCTGAGC CTGGCCTGCT GCCTGCTGAT CTTTTTTACA GTCCGGTACG AGTTGAGCTT TGACAGCCAT CACCAGCATG CCGACCGCCT TTACCGGCTT CTCAATCAGA ATGTTAATGA TGGGGAAAAA GGGTTCTCGG CCGGCATTCC GCTTCCTGCA TTGGCTGCTC TCCGCAACGA CTATCCCGAG ATCCGGGAGC ATGTGGCCTG CACATACGGC ATGCGTGAGA CGCTGATTAC GGTGACGGAC GGAAAGGAAA AGAAGAAGTT TTCGGACCCT GGCTATAATG TGGCGTTTGT CGGTCCCGAG TATTTCACGA TGTTCGATTA CCGGTGGCTG AAAGGTTCGC CGTCGCAAGC GCTCAAAAAC CCCGGCTCGG TGGTATTGAC GGAAGGAGAC GCGCTAAAAT ACTTTGGTAA TGCCGATCCG ATCGGGAAAA CCATCCGGGT GAGAAACCAG ATGGACTTCG TCGTGACGGG CGTCGTTGCC AACCCGCCTG CAACGACCAA TTTGCCTTTT ACCACCATGC TTTCGTTCGG CTCGCTGAAA GAATTCGGCG CGTTTACGAA CTGGGACGAT TGGATATCTT CCTACGGCGG CGGACAGATG TACATCATGC TGCCCGAGCA TGTGAGCGAG GCGCAGTTTG AAAAGCAATT ACTCGCATTC AACAAAAAAT ACCGCGATCC CAAGGATGCC GAAACGCTGC GGTTCGTTTT GCAGCCGTTG AAAGACATTC ATTTTGCCAC CAAAATGGGC AACTACGCGA ACCGCTCGAT CAGCAAGGGA ATGATCTGGA CCATGTCGCT GGTCGGGATA TTTATCCTTG TTATCGCCTG CGTGAACTTT GTAAACCTCG CCACCGCACA GGCGCTACGC CGCTCGCGCG AGGTGGGCGT GAGGAAGGTA CTGGGAAGCA CGAGAGGGCA GTTACTGCGC CAATATTTCT CCGAAACGGG CATTATCACC ACCTTCTCGG TGATCGTAGC ACTCATTGCC GCGCAGTTAT TACTTCCCTA CATCAGCAAT ACGCTCAACA TCAATGCGGA CAATGTGGTG TTCTTCAAAG ACCCGTGGAT ATTGCTGTGC TGCATCGCAT TAACGCTTGT TACGACTTTC CTGGCGGGTT TTTACCCGGC GCTGGTGGTA TCGGGTTACC AGCCGATACT CGCATTGAAA GGTAAAATGA CCAAGAATGG GAGCAGCCAG ACTAATCTGC GGAGGGGGCT GATCGTACTG CAATTCTCGA TTTCCCAAGT GATTCTGATC GGCACGCTTA TCGCTTACAG CCAGATGAAG TATTTCAGAT CCATGGACCT GGGTTTTGAA AAAGACGAGA TCGTGACCAT CGCGATCCCG GATGAAAAGC AGCTGGAAAC ACTGAGCCAG AAGGTAACGG CCATTCCCGG AGTTAAATCC ATCACGTACA GTGCATTCAC GCCGATGTCG CGAAGCAATT GGCAAACCGG GTTCAAATAC GAAAATGATC CCGAATTCCT GGAATTTGAT ATCGTAATGC GCCCTGCGGA CACGTCGTAC TTCCACACAT TCGGACTGAA AATGGCTGCG GGAAGGATGT ACCTTCCGTC GGATACGGCG CGGGAATATG TCGTGAACGA GGCATTTGCC CGCAAACTCG GTTTTAAAGA CCCCGAGGGC ATCATCGGCA AGCGGCTGAC GATCGGCGGC AGCGACTTCA AGTTGCCGAT CGTGGGCGTT GTGAAAAATT TCAATACTTA CACATTACAC CAGGAAATCA TTCCCTGCGT AATGGCTTCG ATGCGAAACA ATTACCGCCT GCTGAACGTG AAACTGGATC GGCACGCGGG GCTCGACCAG GTCCACCGCA TCGAAAAAGC CTGGACGGAA TCATTTCCGG ATTATCTGTT CAAATACACT TTCTACGACC AGACGCTCGA CAGCTTTTAC GAAAAAGAAG CCAAGCTCTT TTCGCTCTTC CAGATACTGA GCGCCATTGC AATATTCGTC GGCTGCCTGG GCCTTTATGG CGTGGTAGCG TTTATGGCCG AGTCGCGTAC GAAAGAAATG GGCATTCGGA AGGCCATTGG CGCATCGGCG ATGAATATTT TCGGCCTTTT CTCGGTCGAT TTTATCAAGC TGGTGGTGAT TGCGCTCGTC ATTGCTTCAC CTATCGCCTG GTATTTTATG GACCAGTGGT TGCAGGATTT TAGTTACAAA GTCAATATCA GCTGGTGGCT GTTTGTGGCT GCTGGTGTGG CGGCGGTGCT TATTGCACTG GTTACGATCA GTTTCCAAAG CATCAAAGCG GCGCTTACGA ATCCCGTAAC GGCCCTAAGG AGTGAATAA
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Protein sequence | MIKNYLTTSF RNLRRNWNFT LINITGLTLS LACCLLIFFT VRYELSFDSH HQHADRLYRL LNQNVNDGEK GFSAGIPLPA LAALRNDYPE IREHVACTYG MRETLITVTD GKEKKKFSDP GYNVAFVGPE YFTMFDYRWL KGSPSQALKN PGSVVLTEGD ALKYFGNADP IGKTIRVRNQ MDFVVTGVVA NPPATTNLPF TTMLSFGSLK EFGAFTNWDD WISSYGGGQM YIMLPEHVSE AQFEKQLLAF NKKYRDPKDA ETLRFVLQPL KDIHFATKMG NYANRSISKG MIWTMSLVGI FILVIACVNF VNLATAQALR RSREVGVRKV LGSTRGQLLR QYFSETGIIT TFSVIVALIA AQLLLPYISN TLNINADNVV FFKDPWILLC CIALTLVTTF LAGFYPALVV SGYQPILALK GKMTKNGSSQ TNLRRGLIVL QFSISQVILI GTLIAYSQMK YFRSMDLGFE KDEIVTIAIP DEKQLETLSQ KVTAIPGVKS ITYSAFTPMS RSNWQTGFKY ENDPEFLEFD IVMRPADTSY FHTFGLKMAA GRMYLPSDTA REYVVNEAFA RKLGFKDPEG IIGKRLTIGG SDFKLPIVGV VKNFNTYTLH QEIIPCVMAS MRNNYRLLNV KLDRHAGLDQ VHRIEKAWTE SFPDYLFKYT FYDQTLDSFY EKEAKLFSLF QILSAIAIFV GCLGLYGVVA FMAESRTKEM GIRKAIGASA MNIFGLFSVD FIKLVVIALV IASPIAWYFM DQWLQDFSYK VNISWWLFVA AGVAAVLIAL VTISFQSIKA ALTNPVTALR SE
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