Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4828 |
Symbol | |
ID | 8228434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5834951 |
End bp | 5835772 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644932677 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_003089194 |
Protein GI | 255038573 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTT ACCCAACCGT ACTTACCATT GCCGGATCCG ATAGTGGAGG TGGCGCGGGC ATTCAGGCCG ATCTCAAAAC GATCGCGGCA CTGGGCGCCT ACGGAACTTC GGCCATTACC GCACTCACCG CGCAGAATAC GCAAGGCGTG CGGGCCATTC ACCCCGTGCC GCCGGCTTTT TTGCAGGAAC AGCTGGAAGC CGTTTTCGAA GACATTACCG TCGATGCCGT CAAGATCGGG ATGGTGAACA CCGTGGAAGT TGCGCGGGTG ATTGCCGACA TGCTCGACCG GTTTAAGCCC GGATTCGTCG TTTTCGACCC GGTAATGGTC TCTACCAGCG GATCCAAACT GATCCAGGAT GAGACCGTCG CCGTGCTGTG GCAGGAGCTT TTTCCCCGTG TGGACCTCAT TACACCTAAT CTCGACGAAG CCGAAATCCT CATCGGTGGG CAAATCCGCA CGCCTGCGAC GATGAAAGGA GCGGCCATTC AAATGGTGGA AAAAGGGTGC AGGGCGGTGT TGCTGAAAGG CGGCCATCTC GTAGGATCGA CGATTTACGA TGTGCTTGCG CAAAGCAGCC AGGAGCCGCT GATCCTCGAA TCGGACTACA TTGAAAGCCG GAATGTCCAT GGCACGGGAT GCACGCTGTC GTCGGCCATT GCCACTTACG TTGCGCGGGG CAATTCACTG GCGGAGTCGA TCATTTTTGC CAAAGAATAC ATTGCGGGGG CAATCCGGTC GGGGGCCGAT GTGGTGACAG GCTACGGTCC GGGTCCTTTG AACCACTCGT TTTCACCAGT TTCCATGCAA ATCGTATCAT GA
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Protein sequence | MNRYPTVLTI AGSDSGGGAG IQADLKTIAA LGAYGTSAIT ALTAQNTQGV RAIHPVPPAF LQEQLEAVFE DITVDAVKIG MVNTVEVARV IADMLDRFKP GFVVFDPVMV STSGSKLIQD ETVAVLWQEL FPRVDLITPN LDEAEILIGG QIRTPATMKG AAIQMVEKGC RAVLLKGGHL VGSTIYDVLA QSSQEPLILE SDYIESRNVH GTGCTLSSAI ATYVARGNSL AESIIFAKEY IAGAIRSGAD VVTGYGPGPL NHSFSPVSMQ IVS
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