Gene Dfer_4821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4821 
Symbol 
ID8228427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5827120 
End bp5828457 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content55% 
IMG OID644932670 
Productethanolamine transproter 
Protein accessionYP_003089187 
Protein GI255038566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00908] ethanolamine permease 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG AACAAACTGC TGCGCTCAAA AAAGTCCTCA AACCGATCCA CCTCTGGGCC 
ATCGCCGTGG GGCTTGTGAT TTCGGGCGAA TATTTTGGCT GGAATTACGG CTGGGGCGTA
TCGGGCACGA TCGGATTCCT CATCGCGACG CTCGTGGTGA CAGTCATGTA CGTGACTTTC
ATTTTCAGCT TCACCGAACT GACTACCTCC ATTCCACAGG CAGGAGGGCC GTTTTCCTAC
GCCTACCGGG CATTTGGCTG GTGGGGAGGG CTCATTGCGG GTTATGCCAC ATTGGTGGAG
TTCCTGGTGA CGCCGCCGGC TATCGCATTC GCACTCGGCA GTTACACGCA TTTTTTATAT
CCCAATTTGC AGGTGCTGGA AGTCGCTTTC GCGTGTTACG CTATATTTAT AGCCATTAAT
TTGCTGGGCA TTAAAGAGTC GGCCACGTTC TCGCTGGTGG TAACCCTGCT CGCGGTGGGT
GAGCTGCTGA TTTACGTCGG CATCGTAGCC CCGCATTTTT CTTATGAAAC CTTCGTCGCC
GAGCCGATGC CTTTTGGTTG GGCCGGCGTG TTTGCAGCCC TGCCGTTCGC GATCTGGTTT
TACCTGGCTA TTGAAGGTGT GGCAATGGTG GCAGAAGAAG TGGAAGACCC GAAAAGAACT
ATCTCACGAG GCTACATTTA CGGCATTCTC ACATTGGTGA TACTTGCGTT GGCCGTGATG
GTTTTCACGG GCGGCATCGC TCCCTGGCAG GAACTGAGCG ATATCGATTA TCCCTTGCCG
GCAGCCCTCG GCATTGTACT CGGGCGCGAC AGCGGGCTTA CGCAGCTTTT CGCCAGCCTG
GGGCTATTCG GACTGATTGC CTCGTTTCAT GGGACCATTA TCGGTTATTC CCGCCAGATT
TTCGCATTGG CGCGGGAAGG TTACCTCCCG TCGTTTCTCG GGAATGTCAA TGCGCGCTTT
CAAACCCCGC ATTGGGCGCT CGTGGCGGGC GGCGTGGCTG GATGCGTGGC GCTTTCCCTC
GGCACTACCG ACCAGGTGAT TATCCTTGCT GCGTTGGGTG CGGTGGTGAT GTACATTATC
AGCATGGTCG CGCTGTTTGC ATTGCGTGTC CGCGAGCCGC AGCTCGAACG GCCGTTCGCT
GTGCCTGCCT TTCCCTATTT TCCGGCTATT GCGCTTGCAT TATCCGCGCT GTGCCTCATC
GCGATCGTTT ACTACAATTT TACGCTCAGC CTTTGGTTTT TTGGCGGGCT GGCTGTGGTT
TCACTGGTTT TCGTAGTAGC CGGCCGCCAC AAAACCATGG AGAACCTGCA ACAGTCAGAA
GAACAGCGCC AAGCTTAA
 
Protein sequence
MSAEQTAALK KVLKPIHLWA IAVGLVISGE YFGWNYGWGV SGTIGFLIAT LVVTVMYVTF 
IFSFTELTTS IPQAGGPFSY AYRAFGWWGG LIAGYATLVE FLVTPPAIAF ALGSYTHFLY
PNLQVLEVAF ACYAIFIAIN LLGIKESATF SLVVTLLAVG ELLIYVGIVA PHFSYETFVA
EPMPFGWAGV FAALPFAIWF YLAIEGVAMV AEEVEDPKRT ISRGYIYGIL TLVILALAVM
VFTGGIAPWQ ELSDIDYPLP AALGIVLGRD SGLTQLFASL GLFGLIASFH GTIIGYSRQI
FALAREGYLP SFLGNVNARF QTPHWALVAG GVAGCVALSL GTTDQVIILA ALGAVVMYII
SMVALFALRV REPQLERPFA VPAFPYFPAI ALALSALCLI AIVYYNFTLS LWFFGGLAVV
SLVFVVAGRH KTMENLQQSE EQRQA