Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4807 |
Symbol | |
ID | 8228413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5811145 |
End bp | 5812323 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932656 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_003089173 |
Protein GI | 255038552 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.916412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.104055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCCA ACATTTCTAA GCTCAAAAAA TACCTCCCCG TCGCATTGGG CGGTATGTTG CTCACCGCTT CGATCGGGCT GATGAGCAAC AGCTCGTCGG ACGATAAACG CGATTCGAAA GCATTCTCTG AAGCCAGTTT CAAGGTTGAT ACCGTGGCTA CCGGCCTCAG CATGCCCTGG GCATCTGCAT TGCTGCCCGG CGGCGAGCTG CTCGTAACCG AGCGCGGCGG CAAATTGCGC ATTGTCAGAA ACGGCAAGCT CGATGCCCAG GAAGTTACCG GCATTCCCGA AGTTTGGTAC AAAGGACAAG GCGGTTTGCT GGATATCGCA CTCCACCCCG ACTATAAATC CAACGGCTGG ATCTACATCA GCTACTCTTC TCCTAAAAAG GAAGGCGAAG AAGGTGACGA CGGCGGCGCC AACACCGCAT TAATGCGCGC TAAACTGAAA GGCAACGCAT TGACCGACAT TCAGCACCTT TTCAAGGCTA TCCCGAATGT AAAAGGCAAT GTCCACTTCG GCGGCCGCAT TGTTTTCGAC AAAAAAGGCT ATGTGTTCCT GTCGCTCGGC GAGCGCGGGC AGAAAGAAAA CTCGCAAAAC CTCGGCCGCG ACCAGGGCAA AGTAGTAAGG CTGCATGAAG ATGGTAAAAT CCCTTCCGAC AACCCGTTTG TGAAAACAGC CGGCGCAAGA CCGGAAATCT GGACCTACGG ACACCGTAAC CCGCAAGGCC TGATCATCAA CCCGGCTACG GGCGTGATCT GGGAGCACGA GCACGGCCCG CAGGGCGGCG ATGAGCTCAA TATCATCGAA AAAGGTAAAA ATTACGGCTG GCCGCTGATC ACCTACGGAA TCGACTACGA CAATAGCATC ATTTCAAAAG ATACCGCGAA GGCTGGCCTT GAACAACCGG TTATCTACTG GAAACCGTCT ATCGCGCCTT GCGGCATGAC ATTCCTGAGC AACGACAAAT ACAAGGACTG GAAAGGCGAC CTCCTGGTAG GCTCGCTGAA ATTCATGTAC CTGCAACACC TCACCGTGCG CGGCAATAAG GTGACCAAGC GTGAGGTGAT TTTCGATAAG ATCGGTCGCG TGCGTGACGT GCGCATGGGC TCGGACGGCA ATGTGTACGT GGTATTGGAA AACTCGGGCA AAGTGGTGCG CCTGACGCCT AAAGGCTGA
|
Protein sequence | MNPNISKLKK YLPVALGGML LTASIGLMSN SSSDDKRDSK AFSEASFKVD TVATGLSMPW ASALLPGGEL LVTERGGKLR IVRNGKLDAQ EVTGIPEVWY KGQGGLLDIA LHPDYKSNGW IYISYSSPKK EGEEGDDGGA NTALMRAKLK GNALTDIQHL FKAIPNVKGN VHFGGRIVFD KKGYVFLSLG ERGQKENSQN LGRDQGKVVR LHEDGKIPSD NPFVKTAGAR PEIWTYGHRN PQGLIINPAT GVIWEHEHGP QGGDELNIIE KGKNYGWPLI TYGIDYDNSI ISKDTAKAGL EQPVIYWKPS IAPCGMTFLS NDKYKDWKGD LLVGSLKFMY LQHLTVRGNK VTKREVIFDK IGRVRDVRMG SDGNVYVVLE NSGKVVRLTP KG
|
| |