Gene Dfer_4799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4799 
Symbol 
ID8228405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5802162 
End bp5802932 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content58% 
IMG OID644932648 
Productprotein of unknown function DUF152 
Protein accessionYP_003089165 
Protein GI255038544 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0186772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTT CTCCTACGAC CGACCCACAA CCATTATTCC GCAAACCACA GATATTCAAC 
CAATTCCCTG AACTCGTTGC CGCTGAAAGT ACACGGCACG GTGGCGTAAG CACGGGCCAT
TACGCCTCGC TCAACCTCGG CGGCTCACAG GATTCGCCCG AGAACATCAT GCAAAACAAC
CTGATTTTCT TCGGCGCATT GGGCATTCAG TTCGGGCAGG TTGCGAAGGC GCATCAAGTG
CACGGGACCG ACATTGTGAC CGTCACCGAG CCCGCACGTT TTGAAGGTTT CGACGCCCTC
GTCACCAATG TAACGGGCAT TCAGCTGGCC GTCACCGTGG CCGATTGCAC CCCGATCCTC
ATTTATGACC CCAAAACAGG CGCCGTGGCC GCCATTCATG CCGGCTGGCG CGGGACGGTG
GGCGGAATCG TGGAAAAGAC GGTGGCGGTG ATGAGCGCCA ACTACGGCAC GAAGGCCGAC
GATTGCTTCG GCTATGTGGG TACTTGTATT GATGAATGCA GTTTTGAGGT CGGCGACGAT
GTAGCGCAGC ATTTCGCGGC GCACTACAAG CGCCGGGACG ATGCCACCGG CAAATTTTTC
GTGGACCTGA AAGCCTCCAA CCGTGACCAG CTCATACGCA GCGGCGTAAG GCCCGGGAAC
ATCGAAGTAT CGCCCTATTC AACCGTAATT CACAACCACG ATTACTTCTC TCACCGCGCC
GAGCGAGGCC TGACGGGCCG CCTGCTGGTG ACGATAGGCC GGATACATTG A
 
Protein sequence
MPASPTTDPQ PLFRKPQIFN QFPELVAAES TRHGGVSTGH YASLNLGGSQ DSPENIMQNN 
LIFFGALGIQ FGQVAKAHQV HGTDIVTVTE PARFEGFDAL VTNVTGIQLA VTVADCTPIL
IYDPKTGAVA AIHAGWRGTV GGIVEKTVAV MSANYGTKAD DCFGYVGTCI DECSFEVGDD
VAQHFAAHYK RRDDATGKFF VDLKASNRDQ LIRSGVRPGN IEVSPYSTVI HNHDYFSHRA
ERGLTGRLLV TIGRIH