| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4779 |
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| Symbol | |
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| ID | 8228385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5777633 |
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| End bp | 5779573 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932628 |
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| Product | ABC transporter related |
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| Protein accession | YP_003089145 |
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| Protein GI | 255038524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000154774 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00318423 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGCGA TTACGAACCT CAGCTATTTT CTGGGCGACC GTGCATTGTA TGACGGCGCT
TCACTTCATA TCAAGCCCAA ACAAAAAATA GGGCTTATCG GGCTTAACGG AACCGGCAAG
TCGACGCTCC TGCGGATGAT CAACGGAGAA TTCCAGCCCG ACGGCGGTTC GATCTCCAAG
GCCGGCGACT GTACGATCGG CTTCCTCAAC CAGGACCTGC TCTCCTACCA AACCGAAGAT
TCGATCCTTT CGGTAGCCAT GCAGGCATTT GAAAGACAGA ACGTTCTCCA AGTGCAAATG
GATAAAATCC TGCACGACAT GGAGCATAAT TATACCGACG ACCTCGTTGA CAAACTCGCC
CGCGTGCAGG AAGAATTCGA GGCATTGGAC GGATATTCGG TTCAATCAAA GGCAGAAGCC
ATTCTGGAAG GCTTGGGCTT CTCGACAGCC GACCTTAACC TGCCGCTGCG GCAATTTTCA
GGGGGCTGGC GTATGCGCGT GATGCTCGCG AAGCTGCTTT TACAAAAACC ATCGCTGCTC
ATGCTCGATG AGCCTACCAA CCACCTTGAC CTTCCGTCGA TCCAGTGGGT GGAAAAATAC
ACGCAGAACT ACGAAGGCGC GGTGATCGTC GTTTCCCACG ACCGCCAGTT CCTAGACAAT
ACGATCGACA CGACGGTGGA AGTTTCGGGT GGAAAACTCA ATTATTACGC CGGAAACTAC
TCCTATTACC TGGAAGAAAA AGCGCTCCGC AACGACATTC AGCGCGGTGC TTACGAAAAC
CAGCAGGCCA AAATCCGTCA GACCGAGCGG TTTATCGAGC GGTTCAAGGC CAAAGCGACC
AAATCGCGCC AGGTACAAAG CCGCGTAAAG GCATTGGATA GAATGGATGT GGTGGATCAG
GTTATTGACG AGAATGCCAA AGTGCATTTC CGCTTCCAGT TTACGACCCA GCCGGGCCGC
CACGTGTTCC AGCTTGAAGA CGCCTCGAAG GCTTATGGCG ACAAGGTGAT CCTTGACGCG
ACGAACATCA GCATGGAACG AGGTGACAAG ATTGCGCTCA TCGGGGCGAA CGGTCGCGGT
AAATCTACCG TGCTGCGCAT TGTGGCCGGC ACCGAGCCCA TCGAGGGTAA GCGTCGGTTG
GGACATAATG TATCGTTTAC ATTCTACGCC CAGCACCAGC TCGAATCGCT GAATGTGGCG
CATAACCTCA TTGAGGAATT GAAATACGCC AACCCGACAA AAACGGAAAC CGAATTGCGA
ACGGTGTTGG GCTGTTTCCT ATTCACGGGG GATGATGTTT TCAAGAAAAT CAAAGTGCTT
TCCGGGGGTG AAAAATCGCG GGTTGCATTG GCTAAGGTAT TGCTTTCACA AGCAAACTTC
CTCCTGCTCG ATGAGCCAAC GAACCACTTG GATATGCAGT CGGTCAATAT TCTGATCCAG
GCGTTACAGC AGTACGAAGG AAGCTACATT GTCGTTTCCC ACGACCGCTA CTTTGTGGAG
AACATTGCGA ACAAGATCTG GTATATCGAA GACCATCAGA TCAAGGAATA TCCGGGCACT
TATGAGGAGT ATGAGATTTG GGTAGAAGAG CGCGGGTTGC AATCGGCGGT TAGCGAAAAA
GTGCAGGTAA GCAGCGCCCC GCCGCAGAAA AGCCAGCCGG GCCCCGCCAA TCAGACCAAG
TCCAAACCGC AGTCCAACGA AGACGCACAA AAGCTCAAAA AAGCGAGAAA GCAGATTGAG
GAACTGGAAG AGACCATTAA CAACCTCGAA ATCAGAAAAG CGGAAACCGA AGGAAAACTG
GCCGAGCCGG GCATTTACAA TGACTCCGTT GCACTCGCAG AAATGAACCG GTTTTATACG
GACATCAAGC AGAAGCTGGA AAAGAACACG GAGGATTGGG AAAATCTGAT GCTCGAAGTG
GAAGAGCTTT CGGGGAAATA G
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| Protein sequence | MIAITNLSYF LGDRALYDGA SLHIKPKQKI GLIGLNGTGK STLLRMINGE FQPDGGSISK
AGDCTIGFLN QDLLSYQTED SILSVAMQAF ERQNVLQVQM DKILHDMEHN YTDDLVDKLA
RVQEEFEALD GYSVQSKAEA ILEGLGFSTA DLNLPLRQFS GGWRMRVMLA KLLLQKPSLL
MLDEPTNHLD LPSIQWVEKY TQNYEGAVIV VSHDRQFLDN TIDTTVEVSG GKLNYYAGNY
SYYLEEKALR NDIQRGAYEN QQAKIRQTER FIERFKAKAT KSRQVQSRVK ALDRMDVVDQ
VIDENAKVHF RFQFTTQPGR HVFQLEDASK AYGDKVILDA TNISMERGDK IALIGANGRG
KSTVLRIVAG TEPIEGKRRL GHNVSFTFYA QHQLESLNVA HNLIEELKYA NPTKTETELR
TVLGCFLFTG DDVFKKIKVL SGGEKSRVAL AKVLLSQANF LLLDEPTNHL DMQSVNILIQ
ALQQYEGSYI VVSHDRYFVE NIANKIWYIE DHQIKEYPGT YEEYEIWVEE RGLQSAVSEK
VQVSSAPPQK SQPGPANQTK SKPQSNEDAQ KLKKARKQIE ELEETINNLE IRKAETEGKL
AEPGIYNDSV ALAEMNRFYT DIKQKLEKNT EDWENLMLEV EELSGK
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