Gene Dfer_4774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4774 
Symbol 
ID8228380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5773255 
End bp5773701 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID644932623 
Productrare lipoprotein A 
Protein accessionYP_003089140 
Protein GI255038519 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.480483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000486811 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTATC GTCGGATTCT GATTCTCACC ATGTTAGCGT TTGCCGCGCT GTTACCAGAA 
GCATTTGCAC AGGTAAAGTT AGGCAAGACG GAAACCGGAA ACGCCTCCTA CTACTCGGCG
CGATTCCATG GCCGGAAAAC CTCCTTCGGC GAAGTACATA AAAGCAGCGA GCTGCTTTGC
GCCCACCGGA GCTACCCGCT CAACACGATG CTTGAAGTGA CGAATCTTGA AAATGACGAG
AAGGTGATTG TTAGAGTCAA TGACCGCGGC CCGTTTTCCA AACACCGGGT TATCGATCTC
AGCAAAGAAG CAGCCCGCCT GCTGGGCATT CTTGCCAAAG GTGTCGCTAA TGTGTCGGTG
AGGGTGGTCG GAATGGAAGG AATGGTGCTC TTATCCCCCA ACGAAGAAAT CGACCCTAAA
TCGGGCAAAG TCATTTCCAT GAAGTAA
 
Protein sequence
MTYRRILILT MLAFAALLPE AFAQVKLGKT ETGNASYYSA RFHGRKTSFG EVHKSSELLC 
AHRSYPLNTM LEVTNLENDE KVIVRVNDRG PFSKHRVIDL SKEAARLLGI LAKGVANVSV
RVVGMEGMVL LSPNEEIDPK SGKVISMK