Gene Dfer_4773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4773 
Symbol 
ID8228379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5772326 
End bp5773240 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID644932622 
Producthypothetical protein 
Protein accessionYP_003089139 
Protein GI255038518 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000601531 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGTCC GCCAACTGGA TCTGGCCAAG GTCAGAGAAT TCGGAAACCT GGAATTTCTT 
GCGAAACAGT TGGTAGAAGG TTTCATCACC GGTCTTCACA AATCCCCTTT TCACGGCTTT
TCAGTCGAAT TTGCCGAACA TCAGCTTTAC AATACCGGCG AATCCACGCG GAATATCGAC
TGGAAGGTTT TTGCCAAAAC CGACCGGCTT TACGTCAAAC GCTACGAGGA AGAGACTAAC
CTCCGTTGCC ACATCCTGCT CGACACATCT TCCTCGATGT ATTATCCGGA AGATAATTTC
GGCAAAATGA CGTTCAGCGT GATGGCGGCT GCGAGCCTTA CGTATTTGCT GCAACGCCAG
AAAGACGCCG TGAGCCTCTG CACGTTTACA GAGCAGATTG AAGTGCAAAC GGCCGTCAAA
TCTACGCCCT CGCATGTGCA CAAAATCATG CTCGAACTGG AACAACAGTT GCAGACCAAA
CGGCCATTGA TGAAAACATC GGTCGCCGAC GTGCTGCACC AGATCGCCGA AAAGATCCAT
AAGCGCTCGC TCGTGGTCAT TTTCAGCGAT ATGTTCGATA ATATTGAAGA AGCTGAAAGG
ATTTTCTCCG CCTTACAGCA TTTACGCCAT AACCTGCACG AAGTACTGCT TTTCCACGTC
ACCGACCGCG AAACGGAAGA AAACTTTGCA TTTGAAAACC GGCCTTATGA GTTTATCGAC
CTCGAAACAG GCGAAAAAAT CAAAGTCCAG CCGGACCAGG TGCGCGAATC GTACCAGCAG
TTTGTGGGCG ATTTTTATCA AAAACTGAAA CTGAAATGCG GGCAATACAA AATCGACTTC
ATCGAAGCGG ATATTGCCAA AGGTTTCGAC CCTGTACTGC TCGCCTATCT GGTGAAGCAC
TCTAAAATGC GCTGA
 
Protein sequence
MSVRQLDLAK VREFGNLEFL AKQLVEGFIT GLHKSPFHGF SVEFAEHQLY NTGESTRNID 
WKVFAKTDRL YVKRYEEETN LRCHILLDTS SSMYYPEDNF GKMTFSVMAA ASLTYLLQRQ
KDAVSLCTFT EQIEVQTAVK STPSHVHKIM LELEQQLQTK RPLMKTSVAD VLHQIAEKIH
KRSLVVIFSD MFDNIEEAER IFSALQHLRH NLHEVLLFHV TDRETEENFA FENRPYEFID
LETGEKIKVQ PDQVRESYQQ FVGDFYQKLK LKCGQYKIDF IEADIAKGFD PVLLAYLVKH
SKMR