| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4772 |
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| Symbol | |
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| ID | 8228378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5770922 |
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| End bp | 5772295 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932621 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_003089138 |
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| Protein GI | 255038517 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000283378 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAAAG CCAAAACGGC ATATTTTTGT CAGGAATGTG GGTATAATTC GCCAAAATGG
GTCGGCAGAT GTCCGTCGTG CGGCGAGTGG AATACTTTCG TTCAGGAAGT GATCGAGAAG
GACGACAAGA AGACAGCGGT GTCGTGGAAA TCGGTGAACC TGGCGAACAA GCCACGGTCG
ATTGCCGAAA TTGTCTACGA AAATGAGCCG CGCATCCGCA CATTCGATGA GGAACTGAAC
CGTGTGCTGG GTGGAGGTAT CGTGCCAGGG TCGTTGGTGC TGATTGGCGG AGAGCCGGGC
ATCGGCAAAT CTACGTTGAT GCTGCAAATC GCATTGACGC TTTCTAATAA GAGGGTTCTG
TATGTTTCCG GCGAAGAATC CGAGGCGCAG ATCAAAATGC GGGCGGAGCG AATGGCGGCC
AAAAGCGACA ACTGCTTCAT CCTCACCGAC ACACAAACGC AAAATATTTT CAGACAAATA
GAAGATTTCC AGCCCGAAAT CCTGATCGTC GATTCCATTC AAACCATGCA ATCGACCTAC
ATCGAGTCGG GTGCGGGCAG CGTGTCGCAG GTGCGGGAAT GCACGGCGGA GTTTATGAAA
TATGCCAAGG AAATGGGCGT GCCGGTGTTT TTGATCGGCC ACATTACCAA AGACGGCTCG
CTGGCCGGCC CGAAAGTGCT GGAACACATG GTGGATACCG TGCTGCAATT CGAGGGCGAC
CGGCACAATA CTTACCGCAT TCTGCGAACG ATGAAGAACC GCTTCGGAAG TACCTCCGAG
CTGGGTATTT ATGAAATGCA GGGAAATGGC CTCCGGCAGG TGAGTAACCC TTCGGAAATC
CTCATTTCGC AGCGCGACGA GCCGGTGAGC GGCATTGCGA TCGGCTCGAT GATGGAAGGC
AATAGGCCAT TGCTGGTGGA AATTCAGTCG CTGGTGAGCG TGGCGACTTA CGGCACGCCG
CAGCGTAGCA GCACCGGTTT CGATGCCAAA CGCTTGCAAA TGCTGCTGGC CGTGCTGGAA
AAGCGCGGCG GTTTCCGGTT AGGCGTGCAG GATGTGTTTC TCAATGTGGC CGGCGGCTTG
AAGGTCGAAG ATCCGGCGAT TGATCTGGCG GTGATCGCCT CGCTGGTGTC TTCCTATGAG
GATAAATTCA TCCCGCCATC GGTATGTTTT GCGGCGGAAG TCGGGCTGGG TGGGGAAGTT
CGTGCGGTGA ATCGCATTGA TAGCCGCGTT TCGGAGGCGG AAAAGCTGGG TTTTAAGAAG
ATTTATATTT CAAAATACAA CAGCAAAGGG CTGGATTTGA AGCGGGGTAA AATTGAAGTG
ATCCCGGTGG CGCATTTGGA TGAACTTTTT ATGTCGCTCT TTCTGAATCA GTAG
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| Protein sequence | MAKAKTAYFC QECGYNSPKW VGRCPSCGEW NTFVQEVIEK DDKKTAVSWK SVNLANKPRS
IAEIVYENEP RIRTFDEELN RVLGGGIVPG SLVLIGGEPG IGKSTLMLQI ALTLSNKRVL
YVSGEESEAQ IKMRAERMAA KSDNCFILTD TQTQNIFRQI EDFQPEILIV DSIQTMQSTY
IESGAGSVSQ VRECTAEFMK YAKEMGVPVF LIGHITKDGS LAGPKVLEHM VDTVLQFEGD
RHNTYRILRT MKNRFGSTSE LGIYEMQGNG LRQVSNPSEI LISQRDEPVS GIAIGSMMEG
NRPLLVEIQS LVSVATYGTP QRSSTGFDAK RLQMLLAVLE KRGGFRLGVQ DVFLNVAGGL
KVEDPAIDLA VIASLVSSYE DKFIPPSVCF AAEVGLGGEV RAVNRIDSRV SEAEKLGFKK
IYISKYNSKG LDLKRGKIEV IPVAHLDELF MSLFLNQ
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