Gene Dfer_4757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4757 
Symbol 
ID8228363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5751938 
End bp5753179 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content51% 
IMG OID644932606 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003089123 
Protein GI255038502 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0254907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAA CCAACAATTC GCAACCTTCG CTGCTCTCGC AGCTGTTGCA AGTGCCAGTA 
ATAGTGGCTG CATTGGGCTA TCTGGTCGAT ATGTACGACC TGTTTTTGTT CAGTGTGGTG
CGGGTGCCCA GTCTCAAAGC GCTGAACGTC CCCGACGACC AGCTGCTCAC CGAGGGCATT
AGTTTATTGA ATTACCAAAT GGCTGGAATG CTGATCGGCG GCGTATTGTG GGGGGTGATC
GCGGATAAAA GAGGTCGGCT TTCGGTGCTT TTCGGATCGA TTATCATGTA TTCGCTGGCC
AATATCGGCA ACGGTTTCGT CACATCGCTT GATCAGTATG CAGTTCTTCG CTTTATTGCG
GGTGTGGGAC TTGCGGGAGA GCTTGGTGCG GGAATTACGC TCGTTACCGA GGTTTTGCCC
AAAGAAATAC GCGGCTATGG AACCACATTG GTGGCTACAT TAGGGGTATT GGGTGCGATT
TTGGCTTACT TTGTTGCCGA CTTGTTTGCC TGGCGTATCT CATATTTCGT GGGCGGCGGC
ATGGGTTTGC TGCTTTTGGT ACTGCGTTTC AATGTATTTG AATCCGGGAT GTTCAAGCAC
GCCAAGGAAC GTTCGGTGGA TCGCGGTAAC ATTATGATGA TCCTGCTCAA CGGCAAACGC
CTCGGTAAAT ACCTGATGGC GATCATCGTA GGACTTCCGA TCTGGTTTGT GGTGGGTATC
CTGATCACAT TTTCGCCGGA ATTCGGCTCG GCAAAGGGCA TCGAGGGCAT TAATGCGGGC
AAGGCGGTAA TGCTGGCGTT TTCAGGGCAG GTAGGCGGAG ATATCGTCAG TGGTTTACTA
AGTCAGTATA TGCGGAGCAG GAAGAAAGTG ATCCGGTTGT TCATCATCCT GTCACTGGCG
ATGGTGGTCG GTTACCTGTT AATTCCGATG CAGGATTTGT TCTCGTTCTA CTTGCTTTGT
ACCTTGCTCG GATTCTGCAA TGGTTACTGG ACATTGTTCA TCACCATTGC CGCGGAACTG
TTCGGCACCA ACCTCCGGGC GACGGTAGCC ACCACGGTTC CCAACTTTGT ACGCGGCGCG
ACGATTCCGC TGGCCGCATT GTTTGTGAGT TTCAGACCCG ACCTGGGCGT GATCCAGAGC
GGTTTAGTGA TAGGGGTTGC CACGGCAGTA ATCGCATTGC TGGCCTTGTA CTTCCTCGAA
GAGACGTTTA CAAAGGACAT GGACTTTGTA GAAAAAGAAT AG
 
Protein sequence
MSTTNNSQPS LLSQLLQVPV IVAALGYLVD MYDLFLFSVV RVPSLKALNV PDDQLLTEGI 
SLLNYQMAGM LIGGVLWGVI ADKRGRLSVL FGSIIMYSLA NIGNGFVTSL DQYAVLRFIA
GVGLAGELGA GITLVTEVLP KEIRGYGTTL VATLGVLGAI LAYFVADLFA WRISYFVGGG
MGLLLLVLRF NVFESGMFKH AKERSVDRGN IMMILLNGKR LGKYLMAIIV GLPIWFVVGI
LITFSPEFGS AKGIEGINAG KAVMLAFSGQ VGGDIVSGLL SQYMRSRKKV IRLFIILSLA
MVVGYLLIPM QDLFSFYLLC TLLGFCNGYW TLFITIAAEL FGTNLRATVA TTVPNFVRGA
TIPLAALFVS FRPDLGVIQS GLVIGVATAV IALLALYFLE ETFTKDMDFV EKE