| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4749 |
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| Symbol | |
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| ID | 8228355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5743023 |
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| End bp | 5745443 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932598 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089115 |
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| Protein GI | 255038494 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.782569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.236895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGA TTTTTACGGC TTTCCTCTTG CTTTTACATA TCACCGCATG GGCCCAGGAC
CGCGTCACGA TCAGCGGTTT CGTGCGGGAA AAAGGCAGCC AGGAGTTGCT CCCCGGCGTG
AATGTGTACA TCGGGAACAC ACCCTACGGC GCAGTGACCA ACACCTACGG ATTTTACTCG
CTTACATTGC CTGCCCAGGA CTCCGCAACG GTTTCGTTCT CATTTGTCGG CTATGAAAAA
CAGGAGAAGC GGGTGGCCCT TCGCGCCGAT ACCGACCTGA ATATCCTGCT TCCTACCATT
ACCCAGCTCG AAGAAGTGGT GGTTTCGGCG CGCCGCCAGG AAGATTATGT GAGTCGCACA
GTGCAGATGA GCAAGGTTGA GATCCCGATC CAGCAACTGA AAAAAGTACC TGCATTTTTC
GGCGAAAAAG ACGTCCTCCG CGTTTTGCAG CTCATGCCCG GCGTGCAAAA AGGCAACGAA
GGCCAAACGG GCCTTTACGT ACGCGGCGGC GGGCCCGACC AGAACCTGAT CATCCTCGAC
GATGCCGTGG TGTACAATGC CAACCACCTT TTCGGATTTT TCTCCATTTT CAATTCGGAT
GCCCTCAGGA GTGTGGAACT CACGAAGGGC GGCTTTCCGG CACGTTATGG CGGCCGGTTG
TCGTCGGTTT TGGAAATGAA TATGAAAGAG GGAAGCAAGG AAAAGCTACA CGGCGAAGGC
GGTATCGGCC TCATTTCCTC CCGCCTGACG CTAGAAGGGC CGATTTCAAA AGGCAAATCT
TCCTTCCTCA TTTCGGGGCG GCGGACTTAC ATTGATGTCC TCGCGGCTCC GCTCATCGCG
CGCGAGCAGC GGGGCGCAGA CAGCCAGGTG AAGCCGGGCT ATTATTTTTA CGACCTTAAT
GCCAAAATGA ACTACGATCT GGGCAAAAAG GATAAGCTTT ACATCAGTGG TTATTTCGGG
CGCGACAAGT TCCACGCCAA TGAGAAAAGC AGCACGTCCG AAACCCGCGC CGGCCTCGAT
TGGGGCAATG CAACAGCCAC CATGCGCTGG AACCATGTTT TGAATCAGAA GCTCTTCGTC
AATACTTCCT TCATTTTCAG CAACTTCAAG TTCGGCGTAT CCAGTTATTC CAAAGAATTG
AACGGCGACG GCTCGCTCGA CGACGAGTTC AGCCTCGAAT ACGATTCACG CATCCGCGAC
CTGGGCATTA AAACAGATTT CGATTTTTAC CCATCTCCCA AACATGCCGT TAAATTCGGC
GGGCAGGCCA CCTTTCACAA GTTCGTCCCG TCCGCGCTGG CCATTGCGGG TACATTTACA
GACAATCCGA TTGAGCGATC GGTAAGGCCG GTTTATTCTC TGGAAACAGG GCTTTACATT
GAAGATACCT GGCAGGCATT GGACGCGCTG AAAATCAATG CGGGACTGCG GCTTAGCACG
TTTCAGACCG ACGTGAAAAC TTATGTCCGC CCCGAGCCTC GCCTTTCGGC CGCATTGCGC
CTGGCCGAAA ACCTTTCGTT CAAAGCCTCT TACGCGCGCA TGAACCAGTA TGTGCATTTG
CTTTCCAACA CCGGCCTTGG CCTCCCTACC GACCTTTGGG TGCCCACCAC CGCGAAGGTA
GCGCCCCAGC AGTCGGAGCA GGTGGCGGCG GGTTTTGCCA AAGACCTCGA ACAGCCGGCG
CTCACCATTA CATTGGAAGG CTATTATAAA AAAATGAACA ACATCCTGAA CTACAAGGAA
GGGTCGTCGT TCCTGAGCCT GAATGGCGAA AATGCCAACG AACTGAGCTG GGAGGACAAT
GTAACTTCGG GAAAGGGCTG GTCGTACGGC GGAGAGTTTT TGATACAGAA GAAAACCGGC
AGATTCTCCG GATGGATCGG TTATACATTA TCATGGACTT ATTGGAAATT CCGTGAATTG
AATTTCGGCC AAACCTTCTT TCCGCGCTAC GACCGCCGCC ACGACCTTTC GGTGGTGGGC
ATTTACGAAA TCAGTAAGCG CATTACGCTG TCCTCCACGT GGGTGTACGG AACCGGCAAT
GCGCTTACGC TGCCCGTGTC GAGCTACCGG GCCGCTACCG ATAATTTCGT GACCCGGCTA
ACGTCCGAAG GGAAACCGGC CATCAGCTGG TTTGGCCCCA CGGTAAACGA ATATGGCCAA
AAAAACAGCT ATCGCGCCGA ACCGTTCCAC CGCATGGATA TCGCCATTCA ATTCCACAAG
AAGAAGAAAC GACATGAACG CACGTGGGAG TTTGGGGTGT ACAATGCATA TAATCGCAGG
AACCCGTTTT TCTACAACAT AGACGAGGAA ATGGTGATCC TGCCGAATGT AATGCCCGCG
ACGCCGGTGC CGAAATACAC GCTGAAACGT TACTCGCTGT TTCCGGTACT GCCCTATTTC
AGCTATAATT TCAAATTCTA A
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| Protein sequence | MRLIFTAFLL LLHITAWAQD RVTISGFVRE KGSQELLPGV NVYIGNTPYG AVTNTYGFYS
LTLPAQDSAT VSFSFVGYEK QEKRVALRAD TDLNILLPTI TQLEEVVVSA RRQEDYVSRT
VQMSKVEIPI QQLKKVPAFF GEKDVLRVLQ LMPGVQKGNE GQTGLYVRGG GPDQNLIILD
DAVVYNANHL FGFFSIFNSD ALRSVELTKG GFPARYGGRL SSVLEMNMKE GSKEKLHGEG
GIGLISSRLT LEGPISKGKS SFLISGRRTY IDVLAAPLIA REQRGADSQV KPGYYFYDLN
AKMNYDLGKK DKLYISGYFG RDKFHANEKS STSETRAGLD WGNATATMRW NHVLNQKLFV
NTSFIFSNFK FGVSSYSKEL NGDGSLDDEF SLEYDSRIRD LGIKTDFDFY PSPKHAVKFG
GQATFHKFVP SALAIAGTFT DNPIERSVRP VYSLETGLYI EDTWQALDAL KINAGLRLST
FQTDVKTYVR PEPRLSAALR LAENLSFKAS YARMNQYVHL LSNTGLGLPT DLWVPTTAKV
APQQSEQVAA GFAKDLEQPA LTITLEGYYK KMNNILNYKE GSSFLSLNGE NANELSWEDN
VTSGKGWSYG GEFLIQKKTG RFSGWIGYTL SWTYWKFREL NFGQTFFPRY DRRHDLSVVG
IYEISKRITL SSTWVYGTGN ALTLPVSSYR AATDNFVTRL TSEGKPAISW FGPTVNEYGQ
KNSYRAEPFH RMDIAIQFHK KKKRHERTWE FGVYNAYNRR NPFFYNIDEE MVILPNVMPA
TPVPKYTLKR YSLFPVLPYF SYNFKF
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