Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4738 |
Symbol | |
ID | 8228344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5729560 |
End bp | 5732943 |
Gene Length | 3384 bp |
Protein Length | 1127 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932587 |
Product | ASPIC/UnbV domain protein |
Protein accession | YP_003089104 |
Protein GI | 255038483 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.411918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAT TATGGCCCTG GAAAGCGGGC AGCATTGTTC TGATCGCTGG ACTGGTACTT TCCGGTTGTG ACAAATCCTC CGATTCCACC AAAGACGAAA AGAAAGACGG CCCGGCGCTC TTCACGCTCC TGGGCCCGGA AAAGACGAAA ATCGATTTCG CCAATACACT GACCGAAGGT TTAAATACCA ACGTATTGAT GTATGAGTAT TTCTATAACG GCGGCGGCGT AGCGGTGGGC GACCTGAATG GCGATGGCCT GGAAGACATT TACTTCACCG GGAATATGGT ACCCAACAAG CTCTATCTCA ACAAGGGCAG CATGGTGTTC GAGGACATTA CGGCCATTGC GCAGGTAGGC GGGCATGAGC GGCCCTGGAA AACGGGCGTT ACCATGGCCG ATGTGAACGG CGATGGTAAG CTGGATATTT ACGTTTGCTA CTCCGGCGCG GTGTCGCCCG AGAGCCTCAA AGACCAGCTA TTTATCAACA AAGGCAACAA TGCTCAGGGC GTGCCGCAGT TTGAAGAAGT GGCGGAGCAA TACGGCCTGG GCGTTTCGAG CAACAGCACA CAAGCGGCAT TTTTTGATTT CGATAAGGAT GGGGACCTGG ATATGTTCCT CCTTAACCAC AACCCGAAAG CACTCCCGAT CCTCGACGAA GCGAGCACCG CCGATATTCT CAAAAAGGAA GATCCGGTAA CAGGCGTAAG GCTGTTCCGC AACGACCCGC AAAACGGCGT GCCGCATTTT ACAGACATTA CCAAAAAAGC GGGCATCCAC AGCTCGCAGC TGACCTACGG CCTCGGTATC GGCATTGCCG ACATTAACCA GGACAGCTGG CAGGATATGT ACATTTCCAA CGACTATTCG GTCCCCGACT TTTTATATAT CAACAATGGC AACGGCACGT TCACCGACGC GCTCGATGCC AGCATCGGCC ACACGTCGCA TTCCTCGATG GGTAACGACA TCGCCGACTT CAATAACGAT GGTCTGCCCG ACATTTTTAC GCTCGATATG CTGCCCGAGG ATAACCGCCG CCAAAAACTG CTGACGGGCC TGGACAACTA TGAATTGTTT GATTTTAATG TCAAAATGGG CTTCCATCAC CAGTATATGC GCAATATGCT GCAACTGAAT GAAGGTATCA CCAAAGGCGC CAAACACCCG GTATTCTCCG AAATAGGCCA GCTTTCGGGC GTGTCGAATA CCGATTGGAG CTGGGCATCG CTCTTTGCAG ACTATGATAA CGACGGCTGG AAAGACCTTT TCATCACAAA CGGCAACCTC CGGGACTTCA CGAATATGGA CTTCGTGAAA TTCATGGGCG ATCATTTGAA GCGCATCGAA GGCCAGGTGA AGCGGGAAGA TGTATTGCAG CTGGTGTATC AGATGCCTTC TTCCAACATG AAAAACTACC TTTTCCAGAA TAAAAAAGAC CTCACTTTTA CCAATGTCGC CGACAGCTGG GGCTTGGGCG AAATCTCCAA CTCAGGCGGA GCCGCCTATG CAGACCTTGA TAACGACGGC GACCTCGACC TGATCGTCAA CAATATCAAT AAACCCGCAT TCATTTATCA GAATGACGGG GACAAGCATT TGAAGAACAA TTACCTGAAA ATCAAGCTGA CCGGAAGCCG CCAGAATACC CTGGGCCTGG GCGCCAAAGT GACCATTTAC CAAAAAGGCC AGCACCAGTA CCTCGAACAA ATGCCGACGC GCGGTTACCA ATCCAGCGTG TCGCCCGTGC TGCATTTCGG TCTGGGCAAG GACGCGGCCG TGGATTCGCT GGTGGTGACC TGGCTGAGCG GCATGCAGGA AAAAGTCATT AATCCCAAAG CAAACACCAC ACTCGCGCTT TCGGAAGCGA ACGCAAAAGC AGGCCCGGGT GCCCGCAAAG GAGCGGCGCC GCTGTTTGCT CCCGTGGCTT CGCCGGTCGC ATTTAAAGGC CCGATAGTGA AACTGAACGA CTTCAAGCGG CAGCCGCTGC TCATTAATCC GCTTTCATTT TCGGGGCCAT GCCTGAGAAA AGGGGATGTA AATGGCGATG GGCTGGAAGA TGTATTCATC GGCGCGACGG CCGGAGAGGC TGGTAAACTG TACATCCAAC AGAAAAGCGG CGCATTTACG CCCAAGCCAG TGCCGGCGTT TGAAGCCGAC AAGCAAAGTG AAGATACCGA CGCATTGTTT TTTGATGCCA ATGGCGACGG TGCATTGGAT ATTTTCGTCG CCAGCGGTGG CTATGCGAGC TTCATGCCCG AAGATCCGCT GCTGCAAAGC CGCCTCTACC TGAACGACGG CAAAGGGAAT TTTACCAAAG CCGCAGGTGC ATTGCCCGCC ATGCTCACCA GCACGAGCTG CGTGCGCTCC GCCGATGTGA ATGGCGACGG TAAGGCCGAC CTTTTCGTGG GCGGTCGCGT GATTCCCGGC CGCTATCCCG AGGCGCCGCG GAGCTACCTG CTCATCAATG ACGGCCAAGG CAAATTCACC GACCAAACCG CCTCCATTTC GAAGGAACTG GAACGCATCG GCCTGGTTAC GGACGCTGCG TGGACGGACC TGAACGGCGA CAAGAAAGCG GACCTCATAT TGGTAGGAGA GTGGATGCCG GTTACGGTGC TGATCAACAA CAACGGGAAG CTGGAAAACC AGACAACCAC CTATTTTGAC AAACCCTACA ATGGCTGGTG GAACAAAATC CTTGTCGAAG ACCTCAATGG CGACGGGAAG GACGACCTCG TGATCGGAAA CATGGGAACC AACACCCAAT GCAAAGCGAG CGACGCCGAG CCGGTGGAAA TGGTTTACAA AGACTTCGAC GACAACGGCT CCGTTGACCC GATCATGAGT TTTTACATTC AGGGCAAAAG CTATCCGTAC GTCACACGAG ACGAGCTTCT GGATCAGATG AGCATCATGC GCACCCGTTT TCAGGATTAC AAAAGCTACG CCGATTTGAC GGTCAACGAG ATTTTTACCA AAGAAGAACT CGAAGGCGCG AAAGAGCTGA AAGCCACTCA CCTTCAAACA GCCTATTTTG AGCGGAACGC AAATGGCAAG TTCACCGAAA AAGCATTGCC GCTGCAAGTG CAGGTCTCTC CGGTGTACAC CATTACTTCG CTGGATTACA ATGCCGATGG TAAAAAAGAC CTGCTGCTCT GCGGCAATGT AAGCAAAGCC CGGCTTCGTT TCGGGAAATA CGATGCCAAC TACGGCGTAT TGCTGCAAGG CGACGGCAAG GGCGGTTTCA CGTACGTCAA CCAGTACAAA TCGGGTTTTG CCTTGAAAGG CGATGTGCGA AGCGTGCTGC CGCTGGGAGA TAAACTGCTG TTCGGAATTA ATCAACAGGA AATAAAAGCG TATCAAATTG GTAAAGTTCA GTAA
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Protein sequence | MKQLWPWKAG SIVLIAGLVL SGCDKSSDST KDEKKDGPAL FTLLGPEKTK IDFANTLTEG LNTNVLMYEY FYNGGGVAVG DLNGDGLEDI YFTGNMVPNK LYLNKGSMVF EDITAIAQVG GHERPWKTGV TMADVNGDGK LDIYVCYSGA VSPESLKDQL FINKGNNAQG VPQFEEVAEQ YGLGVSSNST QAAFFDFDKD GDLDMFLLNH NPKALPILDE ASTADILKKE DPVTGVRLFR NDPQNGVPHF TDITKKAGIH SSQLTYGLGI GIADINQDSW QDMYISNDYS VPDFLYINNG NGTFTDALDA SIGHTSHSSM GNDIADFNND GLPDIFTLDM LPEDNRRQKL LTGLDNYELF DFNVKMGFHH QYMRNMLQLN EGITKGAKHP VFSEIGQLSG VSNTDWSWAS LFADYDNDGW KDLFITNGNL RDFTNMDFVK FMGDHLKRIE GQVKREDVLQ LVYQMPSSNM KNYLFQNKKD LTFTNVADSW GLGEISNSGG AAYADLDNDG DLDLIVNNIN KPAFIYQNDG DKHLKNNYLK IKLTGSRQNT LGLGAKVTIY QKGQHQYLEQ MPTRGYQSSV SPVLHFGLGK DAAVDSLVVT WLSGMQEKVI NPKANTTLAL SEANAKAGPG ARKGAAPLFA PVASPVAFKG PIVKLNDFKR QPLLINPLSF SGPCLRKGDV NGDGLEDVFI GATAGEAGKL YIQQKSGAFT PKPVPAFEAD KQSEDTDALF FDANGDGALD IFVASGGYAS FMPEDPLLQS RLYLNDGKGN FTKAAGALPA MLTSTSCVRS ADVNGDGKAD LFVGGRVIPG RYPEAPRSYL LINDGQGKFT DQTASISKEL ERIGLVTDAA WTDLNGDKKA DLILVGEWMP VTVLINNNGK LENQTTTYFD KPYNGWWNKI LVEDLNGDGK DDLVIGNMGT NTQCKASDAE PVEMVYKDFD DNGSVDPIMS FYIQGKSYPY VTRDELLDQM SIMRTRFQDY KSYADLTVNE IFTKEELEGA KELKATHLQT AYFERNANGK FTEKALPLQV QVSPVYTITS LDYNADGKKD LLLCGNVSKA RLRFGKYDAN YGVLLQGDGK GGFTYVNQYK SGFALKGDVR SVLPLGDKLL FGINQQEIKA YQIGKVQ
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