| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4714 |
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| Symbol | |
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| ID | 8228320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5692273 |
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| End bp | 5693985 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932563 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003089080 |
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| Protein GI | 255038459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.688275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATT TTAATATTGA TAGTAAAAAA GCCCGCACTT ACGATGCCAT TGTGATTGGC
TCGGGGATCA GCGGCGGTTG GTCGGCTAAG GAGCTGACCG AAAGAGGACT GAAAACCCTC
GTACTCGAAC GCGGCCGGGA CGTGCAGCAC ATCAAGGATT ACCCTACCAC GAACATGATG
CCGTGGGAGT TTGAGCACCG CGAGCGCCTT CCCAAGGAAA TCGCCGATGC GAACCCGATT
GCGGCTCGCT GCTATAACTT CAAGGAATCG TCGATGCACT TCTTCGCGAA GGATAATGAG
CATCCGTACA TTCAGGAAAA GCCTTTCGAC TGGCTTCGCG GTTACCAGGT AGGCGGCAAG
TCGCTGCTTT GGGCGCGGCA AACGCAGCGT TGGAGTAAGT ACGATTTCGA AGGCCCCGCG
CGTGACCAAT TCGCCGTGGA ATGGCCGATC GGGTACGACG ACATTGCGCC CTGGTACAGC
CACGTGGAGA AATTCGCGGG CATTACCGGC AACAAGGACG GTATCGACGC ATTGCCGGAT
GGCGAGTTCC TCCCGCCGCA CGAGCTCAAC TGCGTGGAGA AATATTTCAA AGAGCAGGTT
TCGAAGCAAT ACAAGGACCG CCACATTATC ATCGGGCGTG CCGCACATAT CACCGAGCCG
CAGCAGATCC ACCTGGATCA GGGCCGCGCC AAATGCCAGC ATCGCACCAT TTGCGAGCGC
GGATGCCCGT TTGGAGGCTA TTTCAGCAGC AATTCCTCCA CAATCCCCTG GGCAGCCAAA
ACGGGCAATA TGACGCTCCG CCCGCATTCG GTGGTGCATT CGATTATTTA CGACGACAAA
AAGCAGAAAG CCTCGGGCGT GCGCGTGATC GATGCGAACA CGAAGCAGAT GATCGAGTTT
TATGCAGACA TTATTTTCCT GAACGCCGCC GCGCTGAACT CCAACCTCGT GCTGCTGAAC
TCCACGTCGA GCCGCTTCCC GAACGGCCTC GGCAACGACA GTGGCCTGCT GGGTAAATAC
ATTGCATTCC ATAACTACCG CGCTACGGTG TCGGGCCAGT ACGAAGGCTT CCTCGATTCG
ACGACGGACG GCAAGCGCCC GAACGGAGGC TATATTCCGC GTTTCAGGAA TGTTTACAAG
CAGGAAACCG ACTTTTTGCG CGGATATGCG GCCGGTTTCA GTGCTTACCG CATGACGTCC
AACGACCGCG ACGGCCTCGG CGAATCGCTG AAAGCAGGTT TGCACGAAAC GAAGTATGGC
AACTGGGGCG TAGGTTCGCA CATGATGGGC GAAACGATCC CGAAAGAGAG CAACTATGTG
GCCCTCGATC AAAATGAAAA AGATCCGTTT GGAATGCCCA AACTGAGAAT CTCGGTCGAT
TACGACGATA ACGACGAGAA GATGATCAAG GATTATATGG AGCAGGTGAG CGAGATGTTC
ACCAAAGCGG GCTTCACCAA TGTGAGAACA AACGACAACC ACCGTAATCC AGGCAACGAT
ATCCACGAAA TGGGCGGCGT GCGCATGGGG AAAGACCCCA AAACGTCGTT GCTCAACAAA
TGGAACCAGC TGCATCATTG CAAAAACGTG TTTGTAACCG ACGGCGCGAG CATGACTTCC
ACCGCTACAC AAAATCCTTC ACTGACTTAT ATGGCCCTCT CGGCCCGGGC CGTGGACTAT
GCGGTAAAAC AACGCAAAGC GAAGAATTTG TAA
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| Protein sequence | MANFNIDSKK ARTYDAIVIG SGISGGWSAK ELTERGLKTL VLERGRDVQH IKDYPTTNMM
PWEFEHRERL PKEIADANPI AARCYNFKES SMHFFAKDNE HPYIQEKPFD WLRGYQVGGK
SLLWARQTQR WSKYDFEGPA RDQFAVEWPI GYDDIAPWYS HVEKFAGITG NKDGIDALPD
GEFLPPHELN CVEKYFKEQV SKQYKDRHII IGRAAHITEP QQIHLDQGRA KCQHRTICER
GCPFGGYFSS NSSTIPWAAK TGNMTLRPHS VVHSIIYDDK KQKASGVRVI DANTKQMIEF
YADIIFLNAA ALNSNLVLLN STSSRFPNGL GNDSGLLGKY IAFHNYRATV SGQYEGFLDS
TTDGKRPNGG YIPRFRNVYK QETDFLRGYA AGFSAYRMTS NDRDGLGESL KAGLHETKYG
NWGVGSHMMG ETIPKESNYV ALDQNEKDPF GMPKLRISVD YDDNDEKMIK DYMEQVSEMF
TKAGFTNVRT NDNHRNPGND IHEMGGVRMG KDPKTSLLNK WNQLHHCKNV FVTDGASMTS
TATQNPSLTY MALSARAVDY AVKQRKAKNL
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