| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4709 |
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| Symbol | |
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| ID | 8228315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5685046 |
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| End bp | 5686485 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932558 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003089075 |
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| Protein GI | 255038454 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.529727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TATTCACCAG TTTGTTTTTG GCGGCGGTTT GCATGGCTTG TTCCGACATT
CTTGAAGAAA AACCCAAATC ACTTGCCTCT GAGAATTTTT ACAATACCGC CGCGGAGGCC
AAGGCCGCAG TGAACGCGAT TTACGGCCCG ATGCGCACCG ACGCCGCATT GTCTACCAAC
TATCCCGCCC AGCTCGAAGG CCTGGCCGAT TACGGCAATT CACGCGGTAC GCAAACGCCC
GTGAGCTTGT ACCAGGGCCT CGATAACACG AACATCAACC GCGTCGCAAC GATCTGGGAC
AACTTTTACC AATCCATCCG GAATGCTAAC CTGGTGATCG CCAATGTGCC GAAAGGGACC
AGCATGACCG ACGCCGAAAA GGCGTCATTC GTGGCCGAGG CCAAGTACAT GCGTGCGCTC
ATCTATTTTG CGCTCGTGCG GAACTGGGCC GGCGTGCCCC TGCGCACGGA GGAGAATATG
ACGGTGGCCG ACATCCCCAG ATCGAGCGTC GACGATGTGT ATAAGCTGAT TGTCGCCGAC
GCATTGGTGG CGGAGGCCGG GCTGGCGGAT AACCCCTCGG AGATTGGCCG CCCGACCAAA
TGGGCCGCGA AAACGCTTTT GTCGGAAATA TACCTGTACC TCGAAAAATG GGAGGATTCG
CGCGCGAAAG CGAAGGAAGT GATCGATGCC AATAAGTACT CGCTGGTGCC GGTGACCGTT
TCGGAGGATT TTCAGAAGAT TTACGGTCCG GAGGTCGTGA ATACGAGCGA GGAGATTTTC
TATTTCAAAT ACTCGCGCCA GCAAGGCTTT GGCCTGGTGA GCTATGCGCA CCGCAAAATC
GGGCCTTATA ACTATTACGG TCCGGGCGGT GTGTATGCTC AGTACACCGA TTCAGTTTCC
AACCCCGTGA TCAAAAACTG GGATTTCAAG GATTTGCGTA AAAACCATAT TCTGTACAAT
GTGGACATCG GCCTGGGCAC TACTTCCATG CTGTTCCGCA AATACCGCGA TCCGCTGGCC
ACCGGCGGTG CTGGCAACGA CTACCCCTGG TACCGCTACG CCGATCTGCT CCTTTTCCAC
GCCGAAGCCG ATGCCCGTGC CAATGGGAAA CCGACCGCCG ACGGTCTCGA AAGCCTGAAC
AAAGTACACC GCCGCGCATA CGGCAAGCCG GCCGAAGCTG CTTCGACGGT CGATTTCAAA
CTCGCCGATT TTGCCTCTTT ACCGACCTTC ATCGACAAGG TGGTGCAGGA GCGCGGCTAT
GAAACCATGT ATGAAGGCAA GCGATGGAAT GACCTGAAAC GATTAGGAAT TGCCAAGCAA
CGCATTTTGG AAGTAAAGAA CATCGTCATC GCCGAAAAGC ACATGCTGTG GCCGATCCCG
AATTCTGAAA TTTTGTATAA CAAAGCCATC ACTGCCAAAG ACCAGAACCC GGGTTACTGA
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| Protein sequence | MKKIFTSLFL AAVCMACSDI LEEKPKSLAS ENFYNTAAEA KAAVNAIYGP MRTDAALSTN
YPAQLEGLAD YGNSRGTQTP VSLYQGLDNT NINRVATIWD NFYQSIRNAN LVIANVPKGT
SMTDAEKASF VAEAKYMRAL IYFALVRNWA GVPLRTEENM TVADIPRSSV DDVYKLIVAD
ALVAEAGLAD NPSEIGRPTK WAAKTLLSEI YLYLEKWEDS RAKAKEVIDA NKYSLVPVTV
SEDFQKIYGP EVVNTSEEIF YFKYSRQQGF GLVSYAHRKI GPYNYYGPGG VYAQYTDSVS
NPVIKNWDFK DLRKNHILYN VDIGLGTTSM LFRKYRDPLA TGGAGNDYPW YRYADLLLFH
AEADARANGK PTADGLESLN KVHRRAYGKP AEAASTVDFK LADFASLPTF IDKVVQERGY
ETMYEGKRWN DLKRLGIAKQ RILEVKNIVI AEKHMLWPIP NSEILYNKAI TAKDQNPGY
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