| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4706 |
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| Symbol | |
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| ID | 8228312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5679627 |
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| End bp | 5680226 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932555 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003089072 |
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| Protein GI | 255038451 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.342852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAG CGTCCTCTTT TCCGGAAGAT CGTGTGCTCT GGCAGGATTT CCTGGCAGGT
GAAGTGCGGG CGTTTGAAAG GCTGATGTCC GACAATTTCC GGCTTCTTTT CCGGTACGGC
AGCAAGTTCT CCAAAGACCG TGAATTGGTG AAGGACAGTA TCCAGGACCT GTTTCTGATC
CTGTGGGAAA AACGGGCCAA TCTCAATCCC GACGCGGCCG TGAAGCCCTA CCTGATGGCG
TCGCTGCGGA GGCTTATGCA CCGGCAGGTA GCGTCGCGCA CGTGGGTGGG CGGCGAGGTT
TTGCAGGACG AGGACGACTT TTTTGAAATT GAATTCTCGG TGGAGGAAAC CTACATTGCC
AATGAGGCCA CCGCCGTTCG CACGCGGCAG TTGCAGCAAA TGCTCAATGC ATTGCCCAGG
CGGCAGAAGG AAGTCGTGTA TCTCAAATTT TTCCAGGAGC TGAGCCGCGA GCAGATCGCC
GAGGTAATGG CCGTGTCGCC GCAGACCGTC TCGAACATGC TGCAAATCGC GATCCGGCAT
TTAAAAGCAC ATTGGAAAGC TGAATTCGTG GTTTTTTTTC TTCTGCATTT TCTCTTTTAG
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| Protein sequence | MKSASSFPED RVLWQDFLAG EVRAFERLMS DNFRLLFRYG SKFSKDRELV KDSIQDLFLI
LWEKRANLNP DAAVKPYLMA SLRRLMHRQV ASRTWVGGEV LQDEDDFFEI EFSVEETYIA
NEATAVRTRQ LQQMLNALPR RQKEVVYLKF FQELSREQIA EVMAVSPQTV SNMLQIAIRH
LKAHWKAEFV VFFLLHFLF
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