| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4696 |
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| Symbol | |
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| ID | 8228302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5664490 |
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| End bp | 5666409 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932545 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003089062 |
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| Protein GI | 255038441 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000012975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TATTTCAAAT ACTATCAATT GCCGTATTGA CATTGGGTTG GAGCTGTAAC
GACGACGATT TCCTGAACCG TCCGCCAACC GGCCAGCTTT CGGAAGACCA GATCTGGACC
GACGAAGGCC AGGTGTTATC CGTGCTGGGC GACCTTTACA ACCGTTATGT CGACATTGCC
ACATTCAAAA CAATCCGGAT CGACAACAAC GACGTGCCGG GCTGGACGAC GGTGGGTGAT
TTCAATGAGG CATTCTGGTC GGAAGCAGGG CGGTATAATG TATTCCAAAA CAGCGGGTGG
GACCTGAAAT CGTGGTCGCA TTGGGACTAT GCCTACATCC GCGAAATGAA CCTGTTTATC
CAGAAATGTA CTGCCGCTGA CAAGCTCAGC CCGGCCGTCC GCGAGCGCTA CCTGGCCGAA
GCACGTTTCC TGCGGGCATC CTACTACTTT GAATTGGTGA AAAGAATGGG CGGCGTGCCG
CTGATCCTCG AACCGATGGT GTACGATTAC AGCGGCGATC CGAGCTACCT GCAACATCCG
CGTGCGAAAG AATCGGAGAT CTATGATTTT GTAATCAAAG AAGCAGAGGA AATCAAAGAC
AAGCTGCCTG CGACACCCGG CGAAAAATCG CGTGCGACCA AAGCCGCTGC GCTGGCAATG
GAAGTGCGGG CGGCGTTGTA CGCCGGCTCG ATCGCGAAGT ATGGCGTAAA CACGCCCGCG
GTTTCATTGC CGGGCGGCGA AGTGGGTATC CCTGCCAATA TGGCCAATGG CTATTATACC
AAAGCATTGG CGGCTGCGAA GGAGATCATT ACCGGCAAGG CAGGTGTGTA TGCATTGTAT
ACCAAAAAGC CGGACTTGTC TGAAAACTTC GCGAGCATTT TCTATGACAA AGCCAACAAC
TCGGAAGTCA TTTTCGTAGA GGATTTCAAA CTGCAAAGCG GGAAGGTGCA TTACTTCACC
GGCTGGAACC AGCCGCGCTA TGGTGCCGAG GAAGAGGAAG GCGGCCGCAT TAACCCGTCG
CTGCAATTCG TGGAAGCATT TGAAAAACTG GATAACACCT TCGCGCCGAT CCCCACAACG
AATGCGAACG GCACGCCGAT TTACTACACC GACCAGACCG ACATTTTCGC AGGCCGCGAC
GCCCGCCTCG CCGGAACGGT AATCTTGCCA GGTACGACTT TCAAAAGTCG TAAGGTGGAC
ATTTGGGCAG GTTATCAGCT CGCCAACGGC ACGGTAATCA GCGGCGACGA CCGCGGTGCA
CAAAAAACGC TTCCCGGGAA AACCGTACCC GAGCAGGTAG TAGGTTTCGA CGGCCCGATC
GACGGCTTCG AATTCACTGC ACAAACCGGC TTTTACCTCC GCAAATACCT CGATCCGGTG
CTCGGCTCCG GCCAGCGCGG GGTGAACAGC GAAGTGTGGC TCGTTCGCTA CCGTTACGCG
GAAGTGCTTC TGAATGCAGC GGAAGCGGCA TTTGAGCTCG GCCAGGCGGC AGAAGCGGCG
GGTTATATGA ATCAGGTCCG CGAACGTGCC GGGTTGGTAA AGCCGCTGAA AGGTTCGGAC
ATCAACTTTG ATCGCATCGT GCACGAGCGC CGCGTGGAGC TCGCATTCGA AGGGCATGTT
TTGTATGATA TGAAAAGATG GCGCATTGCG CACCAGATCA TGGACGGCAA TGCGATCACC
GCCGCCGAGG TTTCCAAGGA TTTGGGCAAA GCCACCAAGC GCAACACGCA GCCCTGGGGA
TTATGGTCAT ACAAAATCTA CGATCCGGGC TCGGCCAACA ATGGCAAGTG GATTTTCAAA
CCGGTTAAAC TCAGCCGCGT CACCGGCTCC GACCGCTTCC AGCTTGGAAA CTACTATTCG
TACATCGACG ACGCCATTAT CAGCAATAAT CCCAAGCTCG TCAGAAACCC GAACCAATAG
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| Protein sequence | MKKIFQILSI AVLTLGWSCN DDDFLNRPPT GQLSEDQIWT DEGQVLSVLG DLYNRYVDIA
TFKTIRIDNN DVPGWTTVGD FNEAFWSEAG RYNVFQNSGW DLKSWSHWDY AYIREMNLFI
QKCTAADKLS PAVRERYLAE ARFLRASYYF ELVKRMGGVP LILEPMVYDY SGDPSYLQHP
RAKESEIYDF VIKEAEEIKD KLPATPGEKS RATKAAALAM EVRAALYAGS IAKYGVNTPA
VSLPGGEVGI PANMANGYYT KALAAAKEII TGKAGVYALY TKKPDLSENF ASIFYDKANN
SEVIFVEDFK LQSGKVHYFT GWNQPRYGAE EEEGGRINPS LQFVEAFEKL DNTFAPIPTT
NANGTPIYYT DQTDIFAGRD ARLAGTVILP GTTFKSRKVD IWAGYQLANG TVISGDDRGA
QKTLPGKTVP EQVVGFDGPI DGFEFTAQTG FYLRKYLDPV LGSGQRGVNS EVWLVRYRYA
EVLLNAAEAA FELGQAAEAA GYMNQVRERA GLVKPLKGSD INFDRIVHER RVELAFEGHV
LYDMKRWRIA HQIMDGNAIT AAEVSKDLGK ATKRNTQPWG LWSYKIYDPG SANNGKWIFK
PVKLSRVTGS DRFQLGNYYS YIDDAIISNN PKLVRNPNQ
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