Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4679 |
Symbol | |
ID | 8228285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5642946 |
End bp | 5644028 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644932528 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_003089045 |
Protein GI | 255038424 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.651305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA AGATCCTCGA TCGGTACCTG ATCAAAAACT TCCTGATTAC CTATGTGTTC GTGGCGTTCG TCATCGTACT GATCATCTGT ATGATCGACT ATACCGAAAA GGTAGACGAC TTTCTCGACA AAAAGGCCCC GCTCCGCGAG ATCATCATCG ATTATTACCT CAATCTGATT CCCTACTGGA TCAATTACAT CAGTCCGCTG ATGGTGTTCA TCGCCACGGT GTTCTTCACC TCGCGCATTG CGGCCCGGAC GGAGATTATC GCCATGCTGA GCAGCGGGAT CAGTTTCGGA CGGATGCTGC GGCCCTACAT GGCCGGCGCG GTGGTGCTGG GTATCCTCAC CTTCATCCAG GTAGGCTGGG TGCTGCCCAA AGCCAATAAG ATCCGCAACA GTTTTGAGAA AACTTATGTA AAAAACGAGT TCTATTTCAG CGGGCATAAC GTGCACATTA CCATCGCGCC CGACGTGTAC GCCTACCTCG AAAGCTATAA CACCACCACG CAAACGGGCA ACAAGTTCAC GATGGAGACG ATCAAAGGCA CGAAACTGCT TCAAAAGTTT TACGCCGACA AGATCGTGTG GCAGCCCAAA AAGGGCAAAT GGACGCTGCA AAACTACCAG GTGCGCACGC TCGACAGCCT GGGCGAGCGC CTGAGCCGTG GCACGGAGAT CGATACGACC ATTAATTTAT CACCCAAAGA TTTCGAAAGT GATTATAACC TGTTCGAAAC TTTCACATTA CCGGAGCTCA ATGCCTACAT TGATTTGCTG AAGAGCCGCG GCGCGGACGG TCTGGAAGTG TATCTCATCG AAAAATATAC GCGGTTCACG CAGCCGTTCG CGATCCTGAT CCTGACGGCC ATCGGTGTGA TCGTTTCGGC CCGGAAAAGC AGGCGGGGTG TGGGCTGGCA GATTGCACTC GGTTTTATGC TGGCATTCAT TTACATCCTG TTCTTTTTGC TGTCCAAGGG CGTCGCCGAG GCGGGAACCA TTAACACACT TTTTGCCGTG TGGCTGCCGA ACATAGTGTT TTCGGCGATC GGCGTGTTGC TTTACAAAAC GTTGCCCAGG TAA
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Protein sequence | MKFKILDRYL IKNFLITYVF VAFVIVLIIC MIDYTEKVDD FLDKKAPLRE IIIDYYLNLI PYWINYISPL MVFIATVFFT SRIAARTEII AMLSSGISFG RMLRPYMAGA VVLGILTFIQ VGWVLPKANK IRNSFEKTYV KNEFYFSGHN VHITIAPDVY AYLESYNTTT QTGNKFTMET IKGTKLLQKF YADKIVWQPK KGKWTLQNYQ VRTLDSLGER LSRGTEIDTT INLSPKDFES DYNLFETFTL PELNAYIDLL KSRGADGLEV YLIEKYTRFT QPFAILILTA IGVIVSARKS RRGVGWQIAL GFMLAFIYIL FFLLSKGVAE AGTINTLFAV WLPNIVFSAI GVLLYKTLPR
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