Gene Dfer_4679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4679 
Symbol 
ID8228285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5642946 
End bp5644028 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content52% 
IMG OID644932528 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_003089045 
Protein GI255038424 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.651305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AGATCCTCGA TCGGTACCTG ATCAAAAACT TCCTGATTAC CTATGTGTTC 
GTGGCGTTCG TCATCGTACT GATCATCTGT ATGATCGACT ATACCGAAAA GGTAGACGAC
TTTCTCGACA AAAAGGCCCC GCTCCGCGAG ATCATCATCG ATTATTACCT CAATCTGATT
CCCTACTGGA TCAATTACAT CAGTCCGCTG ATGGTGTTCA TCGCCACGGT GTTCTTCACC
TCGCGCATTG CGGCCCGGAC GGAGATTATC GCCATGCTGA GCAGCGGGAT CAGTTTCGGA
CGGATGCTGC GGCCCTACAT GGCCGGCGCG GTGGTGCTGG GTATCCTCAC CTTCATCCAG
GTAGGCTGGG TGCTGCCCAA AGCCAATAAG ATCCGCAACA GTTTTGAGAA AACTTATGTA
AAAAACGAGT TCTATTTCAG CGGGCATAAC GTGCACATTA CCATCGCGCC CGACGTGTAC
GCCTACCTCG AAAGCTATAA CACCACCACG CAAACGGGCA ACAAGTTCAC GATGGAGACG
ATCAAAGGCA CGAAACTGCT TCAAAAGTTT TACGCCGACA AGATCGTGTG GCAGCCCAAA
AAGGGCAAAT GGACGCTGCA AAACTACCAG GTGCGCACGC TCGACAGCCT GGGCGAGCGC
CTGAGCCGTG GCACGGAGAT CGATACGACC ATTAATTTAT CACCCAAAGA TTTCGAAAGT
GATTATAACC TGTTCGAAAC TTTCACATTA CCGGAGCTCA ATGCCTACAT TGATTTGCTG
AAGAGCCGCG GCGCGGACGG TCTGGAAGTG TATCTCATCG AAAAATATAC GCGGTTCACG
CAGCCGTTCG CGATCCTGAT CCTGACGGCC ATCGGTGTGA TCGTTTCGGC CCGGAAAAGC
AGGCGGGGTG TGGGCTGGCA GATTGCACTC GGTTTTATGC TGGCATTCAT TTACATCCTG
TTCTTTTTGC TGTCCAAGGG CGTCGCCGAG GCGGGAACCA TTAACACACT TTTTGCCGTG
TGGCTGCCGA ACATAGTGTT TTCGGCGATC GGCGTGTTGC TTTACAAAAC GTTGCCCAGG
TAA
 
Protein sequence
MKFKILDRYL IKNFLITYVF VAFVIVLIIC MIDYTEKVDD FLDKKAPLRE IIIDYYLNLI 
PYWINYISPL MVFIATVFFT SRIAARTEII AMLSSGISFG RMLRPYMAGA VVLGILTFIQ
VGWVLPKANK IRNSFEKTYV KNEFYFSGHN VHITIAPDVY AYLESYNTTT QTGNKFTMET
IKGTKLLQKF YADKIVWQPK KGKWTLQNYQ VRTLDSLGER LSRGTEIDTT INLSPKDFES
DYNLFETFTL PELNAYIDLL KSRGADGLEV YLIEKYTRFT QPFAILILTA IGVIVSARKS
RRGVGWQIAL GFMLAFIYIL FFLLSKGVAE AGTINTLFAV WLPNIVFSAI GVLLYKTLPR