Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4666 |
Symbol | |
ID | 8228272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5629099 |
End bp | 5630256 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644932515 |
Product | Propeptide PepSY amd peptidase M4 |
Protein accession | YP_003089032 |
Protein GI | 255038411 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAC TGATTGGAAA ACTGCACTTG TACCTGGGGC TTGTCTCGGG GATTATGGTG TTTATTATTT CGATCACGGG GTGTATCCTG GCTTTCGAGC AGGAAATTAA AAGCATTACG CAGCCCTATA TGTTCGTGAA CGGCCCCACC GGCGGGAAGG TGCTGCCGCC TTCGGAGCTG GCCGAAATTG CCAAAAAGGC ACTGCCCGGC AAGGTGGCCA AAGGTGTGCT TTACGACACG CCCGACCGCA ATGCGCAAGT CGGATTTTAC AACCTTGATC CTGAATATTA TTACGTCGTT TACCTCAACC AGTACACCGG AAAAGTGGAG CATATCTGGA ACGAGGACGA CGATTTCTTC CATTTTATCC TCCACGGGCA CTATTACCTG TGGCTCCCTG AAAAATACGG CCAAACCGTC GTGGCATCGG CGACGCTCGT TTTCCTGTTC ATGATGATCA GCGGGATGGT GCTTTGGTGG CCCAGGAACA AATCGGCGGC CAAACAGCGG TTTTCGATCA AATGGAATGC TGCCTGGCGC CGTAAAAACT ACGACCTGCA CAATGTCCTT GGCTTTTACA TGATGTCCAT CGGCGTGGTT TTGGCGGTTA CCGGGCTCGT TTGGGGCTTT CAGTGGTTTT CGCAGGGGCT CTACACGGCC ACCGGCGGTG AAGGCTCGGA TATGTACTAT AATCCCGTTT CCGACACCGT TTCAACTGCC CGGGTAGCCG GACCGATGCA AGCCGTGGAC AAGGCATGGT ATCAGTTGCA GAATGAATAT CCTAAATATT CAACTCTCAA TATTTCCTTC CCAACCGAGA AAGCGGAGTC GATTTTCTCT TATGTAAACT TCCGCGAAGG CACCTATTAC AATGTCGATT ATAACTATTT TGATCAGTAC TCTGTCAAAA AAATCGATGC AACGGGCCCC TATACCGGTA AATACAGCGA GGCGAATTTT GCCAATAAGC TGCGCCGCAT GAACTACGAC ATTCACACGG GTGCCATTCT TGGGCTGCCG GGCAAAATCC TGATGTTTTT CGCCAGCCTG GTTTGCGCAT CGCTGCCCGT AACTGGTTTC GTAATCTGGT GGGGCCGACG CAAAAAAGCG CCTAAAAAGG TGAGAAGGAG TGTGCCCGCT ATGAAACCCG CGATTTAA
|
Protein sequence | MKKLIGKLHL YLGLVSGIMV FIISITGCIL AFEQEIKSIT QPYMFVNGPT GGKVLPPSEL AEIAKKALPG KVAKGVLYDT PDRNAQVGFY NLDPEYYYVV YLNQYTGKVE HIWNEDDDFF HFILHGHYYL WLPEKYGQTV VASATLVFLF MMISGMVLWW PRNKSAAKQR FSIKWNAAWR RKNYDLHNVL GFYMMSIGVV LAVTGLVWGF QWFSQGLYTA TGGEGSDMYY NPVSDTVSTA RVAGPMQAVD KAWYQLQNEY PKYSTLNISF PTEKAESIFS YVNFREGTYY NVDYNYFDQY SVKKIDATGP YTGKYSEANF ANKLRRMNYD IHTGAILGLP GKILMFFASL VCASLPVTGF VIWWGRRKKA PKKVRRSVPA MKPAI
|
| |