Gene Dfer_4666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4666 
Symbol 
ID8228272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5629099 
End bp5630256 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content51% 
IMG OID644932515 
ProductPropeptide PepSY amd peptidase M4 
Protein accessionYP_003089032 
Protein GI255038411 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TGATTGGAAA ACTGCACTTG TACCTGGGGC TTGTCTCGGG GATTATGGTG 
TTTATTATTT CGATCACGGG GTGTATCCTG GCTTTCGAGC AGGAAATTAA AAGCATTACG
CAGCCCTATA TGTTCGTGAA CGGCCCCACC GGCGGGAAGG TGCTGCCGCC TTCGGAGCTG
GCCGAAATTG CCAAAAAGGC ACTGCCCGGC AAGGTGGCCA AAGGTGTGCT TTACGACACG
CCCGACCGCA ATGCGCAAGT CGGATTTTAC AACCTTGATC CTGAATATTA TTACGTCGTT
TACCTCAACC AGTACACCGG AAAAGTGGAG CATATCTGGA ACGAGGACGA CGATTTCTTC
CATTTTATCC TCCACGGGCA CTATTACCTG TGGCTCCCTG AAAAATACGG CCAAACCGTC
GTGGCATCGG CGACGCTCGT TTTCCTGTTC ATGATGATCA GCGGGATGGT GCTTTGGTGG
CCCAGGAACA AATCGGCGGC CAAACAGCGG TTTTCGATCA AATGGAATGC TGCCTGGCGC
CGTAAAAACT ACGACCTGCA CAATGTCCTT GGCTTTTACA TGATGTCCAT CGGCGTGGTT
TTGGCGGTTA CCGGGCTCGT TTGGGGCTTT CAGTGGTTTT CGCAGGGGCT CTACACGGCC
ACCGGCGGTG AAGGCTCGGA TATGTACTAT AATCCCGTTT CCGACACCGT TTCAACTGCC
CGGGTAGCCG GACCGATGCA AGCCGTGGAC AAGGCATGGT ATCAGTTGCA GAATGAATAT
CCTAAATATT CAACTCTCAA TATTTCCTTC CCAACCGAGA AAGCGGAGTC GATTTTCTCT
TATGTAAACT TCCGCGAAGG CACCTATTAC AATGTCGATT ATAACTATTT TGATCAGTAC
TCTGTCAAAA AAATCGATGC AACGGGCCCC TATACCGGTA AATACAGCGA GGCGAATTTT
GCCAATAAGC TGCGCCGCAT GAACTACGAC ATTCACACGG GTGCCATTCT TGGGCTGCCG
GGCAAAATCC TGATGTTTTT CGCCAGCCTG GTTTGCGCAT CGCTGCCCGT AACTGGTTTC
GTAATCTGGT GGGGCCGACG CAAAAAAGCG CCTAAAAAGG TGAGAAGGAG TGTGCCCGCT
ATGAAACCCG CGATTTAA
 
Protein sequence
MKKLIGKLHL YLGLVSGIMV FIISITGCIL AFEQEIKSIT QPYMFVNGPT GGKVLPPSEL 
AEIAKKALPG KVAKGVLYDT PDRNAQVGFY NLDPEYYYVV YLNQYTGKVE HIWNEDDDFF
HFILHGHYYL WLPEKYGQTV VASATLVFLF MMISGMVLWW PRNKSAAKQR FSIKWNAAWR
RKNYDLHNVL GFYMMSIGVV LAVTGLVWGF QWFSQGLYTA TGGEGSDMYY NPVSDTVSTA
RVAGPMQAVD KAWYQLQNEY PKYSTLNISF PTEKAESIFS YVNFREGTYY NVDYNYFDQY
SVKKIDATGP YTGKYSEANF ANKLRRMNYD IHTGAILGLP GKILMFFASL VCASLPVTGF
VIWWGRRKKA PKKVRRSVPA MKPAI