Gene Dfer_4633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4633 
Symbol 
ID8228239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5594920 
End bp5595699 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content48% 
IMG OID644932482 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003088999 
Protein GI255038378 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0621063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAT TAGAAAAAAC CATTTTAGCA GCCCTGGCTT TTGGAGTATT GGCAATCGCG 
GAAGGCAACG CACAGACTAT CAAGAAAACA ACTAAACCCG CCGCAACTGT AAAGAAATCA
GCGGCAACAC CGGCGAAGTC AGCGGCATCA CCAGCGAAAA CAACGGCAGC CCCTGCAACA
TTAAAAACAT CGGCCGACTC TTTGTCAGCA GCAATAGGGG TAAGCTTCGC CAATTCAATA
GCATCACAAG GAATTACCGA CCTGAACGCC GACCTGCTTA CCCAGACGGT AAAAGCGGCC
CTGAAAGGTG AAAAAACCGC ATTTACGTCG GATGAAGCCA ATATGTTCAT CCAGGGCTAC
TTCACGAAAA TGATGGAGGA GAAGGGCGCA GTAGTACGTA AGGAAGGGGA AAAGTTTTTG
GAAGAAAACA AGAAGAAGGA AGGTGTAGTG ACCACCGAAA GCGGTCTGCA ATATCAGATT
ATCAAAACTG GCGACGGTCC CAAGCCGGCG GCAACAGACA AAGTAAAAAC ACACTACCAC
GGCACATTGA CCAATGGAAC GGTTTTTGAC AGCTCGGTCG ACAGAGGCGA GCCGGTTGAG
TTCCCGGTCA ATGGTGTGAT CAAAGGATGG ACCGAAGCGC TTCAGTTAAT GCCTGTCGGA
TCGAAATGGA AGCTTTTTAT TCCATATCAG CTGGCTTACG GTGAGCGTGC GGCAGGACCT
CAGATACCGG CTTATTCAGC CCTCGTATTT GAGGTTGAAT TATTGGAAAT CGTAAAATAG
 
Protein sequence
MYKLEKTILA ALAFGVLAIA EGNAQTIKKT TKPAATVKKS AATPAKSAAS PAKTTAAPAT 
LKTSADSLSA AIGVSFANSI ASQGITDLNA DLLTQTVKAA LKGEKTAFTS DEANMFIQGY
FTKMMEEKGA VVRKEGEKFL EENKKKEGVV TTESGLQYQI IKTGDGPKPA ATDKVKTHYH
GTLTNGTVFD SSVDRGEPVE FPVNGVIKGW TEALQLMPVG SKWKLFIPYQ LAYGERAAGP
QIPAYSALVF EVELLEIVK