Gene Dfer_4615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4615 
Symbol 
ID8228221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5577386 
End bp5578627 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content56% 
IMG OID644932464 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003088981 
Protein GI255038360 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TCACTCCTGT TCAACCCAAG CTCAGCGCCG TTTTCACATT GCCTGTAATC 
GTAGCCTCGC TGGGCTATTT TGTGGATGTG TATGATCTGC TGCTTTTCAA CATCGTGCGC
GTGCCGAGTC TGAAAGACCT CGGGCTATCG GAAGAGGAAA TCTCGCAGAT CGGCGCGAAC
ATTTATAATT GGCAGCAGGC GGGGCTGCTG ATCGGCGGCT TTTTGTGGGG GATTTTGGGT
GATAAACTCG GCCGGCGGTC GGTGCTTTTT GGCTCTATTC TCACCTACTC GCTTGCCAAT
ATCGCCTGCG GATTTACACA AAACGTCGAA ATCTACGCCC TTCTGCGGTT TATCGCCGGT
TTCGGATTGG CGGGTGAGCT TGGTGCCGGC ATTACGTTGA TTGCCGAGAT CCTTCCGAAA
GAACTGCGTG GTTATGGTGC GTCGGTGGTG GCGAGCGTGG GCCTTGCCGG GGCGATCGCG
GCATTTTTCG CCGTCAAACT GACCGACTGG CGCATGGCTT ATTTCATCGG CGGCGGAATG
GGGCTGATCC TGCTTGTGCT CCGCGTGAAT GTGCTGGAAT CCGTCGTGTT CAACAAAAGC
CTCGAAAAGC GCGGCTCGAA ACCCGTTCCG TGGTGGACGA TATTCACGAG CTGGTCGCGA
TTTGTGCGTT ACATGCGCTG CATGGGCATC GGGCTGCCTA CGTATATGGT TATCGGTATT
TACTCCACAT TCGGGAATGA ATTCGCGAAG GCGCTGGGCA TTGCGGAGGA AGTTCAGGCG
GGCACGTGCG TGCTGTACAC GTACATAGGT GTGGTCACGG GCGACTTTTT CAGCGGGATA
CTCAGCCAAT GGCTTCGTTC GCGCCGGAAG GCGATACTAT GGATGATGCT GATGACCCTT
GCCGGTGTGG CCTGGCTGCT TTCGGGAGGC ATTCACACGG CTACCGCGCT CTACATTTGC
TACATGTGGC TCGGGTTTTC GATTGGCTAC ATCGCCATGT TCCTCACCAC AACGGCCGAG
CAATTCGGCA CCAACCTGCG CGCAACAGTC ACGACTTCCG TTGCCAACAA TGTACGCGCC
ACGGTGCTGC TTACATTGCC CCTGTTCCAG TTCCTGAAAA AGGACTCCGG CGTGCTGCAT
TCGGGCGCGA TCGTGGGCGC GTTGTGCTTT TCGCTTGCAT TGCTTTCGCT CTGGCGGATG
GAGGAAACTT ATGGCAAAGA GCTGGATTAT GAAGAAAAAT GA
 
Protein sequence
MTAVTPVQPK LSAVFTLPVI VASLGYFVDV YDLLLFNIVR VPSLKDLGLS EEEISQIGAN 
IYNWQQAGLL IGGFLWGILG DKLGRRSVLF GSILTYSLAN IACGFTQNVE IYALLRFIAG
FGLAGELGAG ITLIAEILPK ELRGYGASVV ASVGLAGAIA AFFAVKLTDW RMAYFIGGGM
GLILLVLRVN VLESVVFNKS LEKRGSKPVP WWTIFTSWSR FVRYMRCMGI GLPTYMVIGI
YSTFGNEFAK ALGIAEEVQA GTCVLYTYIG VVTGDFFSGI LSQWLRSRRK AILWMMLMTL
AGVAWLLSGG IHTATALYIC YMWLGFSIGY IAMFLTTTAE QFGTNLRATV TTSVANNVRA
TVLLTLPLFQ FLKKDSGVLH SGAIVGALCF SLALLSLWRM EETYGKELDY EEK