| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4610 |
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| Symbol | |
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| ID | 8228216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5570837 |
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| End bp | 5572960 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932459 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003088976 |
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| Protein GI | 255038355 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.11401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTT CAAATGTAAG CCAGTACAGG TATGTAAGCT ATTTATGGGA TGAAGAGAAA
GCCGCTTCCC TGGGTGATGA TCAGGTGGCG CTTCTTCTTT ACCGTTCAAA TCTGTTGGGT
GCCGATCTTC GCCTGACCAA CTACGCTGGT GGAAACACGA GCTGTAAAAC CATCGAAAAA
GATCCGCTCA CGGGCAACCC CGTGGAGGTA ATGTGGATCA AGGGATCGGG CGGCGATATT
GGTACTTTAA CAAGAAGCGG ACTGGCCGGC TTGTACGTCG ACCGCCTGCA TAGCCTCAAA
AACATCTACC GCGGACTGGA ATTTGAAGAT GAGATGGTGG AACTGTTCAA CCATTGCATT
TACGACCTGA AATCCAAGGC ACCATCTATC GACACGCCGC TGCACGGCCT GCTGCCTTTC
AAGCATATCG ACCACCTGCA CCCCGATGCA TTGATCGCCA TCGCGGCATC GAAGGAGGGT
GAGGCCATTA CCAAAGAACT ATTCAACGGT GAACTCGCGT GGGTACCCTG GCAACGCCCC
GGCTTCGACC TCGGTTTGCA GCTGGAACAG GCATTGAATG ATAATCCGGG CATTCGCGGG
ATCGTCTTGG GCGGTCACGG CTTGTTTACC TGGGGTGATA CAGCTTACGA ATCATACATT
AACACGCTCG ATACGATCGA AAGAGCGTCG GATTACCTGG CTCAGAACTA TGGCAAGAGC
CGCCCGGTTT TCGGTGGCGC ACGCCTGGAA AGCGAGCCGA AAGAGCGCCG CGCATCTATC
GCCGGCAAGT TGGCGCCTTA CCTGCGCGGA CTGGCTTCCG AGCAGCAAGC CATGATCGGT
CACTTTACCG ATGACGAGCG TGTATTGGAA TTCATTGCCA GCAATGACCT TGACAAACTG
GCGCCACTCG GTACCAGCTG CCCCGACCAC TTCCTGCGCA CAAAAATCCG TCCGCTGGTA
CTCGACCTGC CATTTGAGAA ACTCGATGCA GCCGATTCCG AAATCCTCGA ACACATCCGT
CCGCAATTCG AAGCTTACCG TGCCGACTAC ATCGCCTACT ACGAGCGCTG CAAGCATTCC
AACAGTCCCG CAGTGCGTGA CCCGAACCCG GTGATCATCC TTTTGCCAGG CGTGGGGATG
TTCTCATTTG CAAAAGACAA GCAGACTGCG CGTGTAGCGG CTGAGTTTTA TATCAATGCC
ATTAACGTAA TGAAAGGTGC TGAGGCGATT TCTTCTTACG TATCATTGCC GGAGCAGGAA
GCATTCGACA TCGAGTATTG GTTGCTCGAA GAAGCGAAAT TGCAGCGTAT GCCGAAAGAA
AAATCGGTAT CCCGCAAAGT AGCATTCGTG ACCGGCGGCT CGGGCGGCAT TGGCAAGGCA
ATCGCTCAGA AATTGTTGCA GGAAGGTGCC TGCGTCGTGA TTTCGGATAT TGATGAAAAT
GCATTGGCTG AGACCAAGGC GGAATTCGAT GCGAAATTCG GCAAGGACTT CTCCGATACG
ACCGTGGCGA ATGTGCTCGA CGACGAGGCG ATCAAAGCGG CATTGCATGC TACCAAACTG
AAATACGGTG GCGTGGATAT CGTGGTAAAC TGCGCAGGTC TGTCGATCTC GAAGCCATTG
GCAGATACGA CTATCAAAGA CTGGGATATT TTGCAGGATG TGTTGGTCAA AGGCCAGTTC
CTTGTATCGC AGGAGTCAGT GGCGATCATG CGCCAGCAAG GCCTGGGGGG TGATATTATC
AACATCGCGA GCAAGAATGG TATCGTTTCC GGCCCGAACA ATGTGGCTTA CGGAACGGCC
AAGGCGGCTC AGCAGCATAT GTCGCGCCTT TTGGCTGCGG AACTTGGTCC GGACAAGATC
CGCGTAAACG TGGTAAATCC CGACGCGGTA ATCGCCGGTA GCAAAATCTG GGAAAGCGGC
TGGGCTGCCG GACGTGCGAA AGCATACGGC ATTAAAGTAG AAGAACTGCC CGCTTACTAC
GCGAAACGAA CGGTACTCAA TGCAGAGATC CATACGGACG ACATCGCAAA CGGCGTATAT
ATTTTCGTGA GCGGCTTGCT CAACAAGAGC ACCGGAAACG TGATCAATGT CGACGGAGGT
GTTCCTGCGG CATTCCTTCG CTAA
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| Protein sequence | MSSSNVSQYR YVSYLWDEEK AASLGDDQVA LLLYRSNLLG ADLRLTNYAG GNTSCKTIEK
DPLTGNPVEV MWIKGSGGDI GTLTRSGLAG LYVDRLHSLK NIYRGLEFED EMVELFNHCI
YDLKSKAPSI DTPLHGLLPF KHIDHLHPDA LIAIAASKEG EAITKELFNG ELAWVPWQRP
GFDLGLQLEQ ALNDNPGIRG IVLGGHGLFT WGDTAYESYI NTLDTIERAS DYLAQNYGKS
RPVFGGARLE SEPKERRASI AGKLAPYLRG LASEQQAMIG HFTDDERVLE FIASNDLDKL
APLGTSCPDH FLRTKIRPLV LDLPFEKLDA ADSEILEHIR PQFEAYRADY IAYYERCKHS
NSPAVRDPNP VIILLPGVGM FSFAKDKQTA RVAAEFYINA INVMKGAEAI SSYVSLPEQE
AFDIEYWLLE EAKLQRMPKE KSVSRKVAFV TGGSGGIGKA IAQKLLQEGA CVVISDIDEN
ALAETKAEFD AKFGKDFSDT TVANVLDDEA IKAALHATKL KYGGVDIVVN CAGLSISKPL
ADTTIKDWDI LQDVLVKGQF LVSQESVAIM RQQGLGGDII NIASKNGIVS GPNNVAYGTA
KAAQQHMSRL LAAELGPDKI RVNVVNPDAV IAGSKIWESG WAAGRAKAYG IKVEELPAYY
AKRTVLNAEI HTDDIANGVY IFVSGLLNKS TGNVINVDGG VPAAFLR
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