Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4608 |
Symbol | |
ID | 8228214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5566667 |
End bp | 5568778 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932457 |
Product | Prolyl oligopeptidase |
Protein accession | YP_003088974 |
Protein GI | 255038353 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.638407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTCAA AAATTTTTCT GATGAGTTTG ATTACAGCAT CGGCATTGTC GGAGTACGGC AATACGCAGC GACTTGCCTA TCCCGAAACG CGGAAACAGG CGCATTTCGA TGAATATCAT GGCGTGAAAG TGGCAGATCC TTACCGCTGG CTTGAAGACG ACCGTTCGGA AGAAACGGCC GAATGGGTGA AAGCCCAGAA TGAGGTTACA TTTGGTTACC TCCGTGCCAT CCCGTTCAGA GAGAAGATTA TCCGGGATTT GGAAAAAGCT TACAACTATC CCAAATATTC CGCGCCGAGG AAGAAAGGCG AATATTTCTA TTTCTATAAA AATGACGGCT TGCAAAATCA GGCTGTACTT TATCGCCAGA AAGGCCTCGA CGGCACACCG GAGGTGGTGG TGGATCCGAA CAAGCTTTCG CCCGACGGCA CCACGCGGCT TACTGTTTTC AGCCTCTCCA AAGACGGTGC ATATGCCGTT TTAGGATTTT CAAAAGGCGG CTCCGACTGG CAGGAATATC AGGTAATGAA AATGCAGGAC CTGTCTAAGC TTTCCGAAAA GGTGGAATGG GTGAAAGTCT CAGGCGCGGC CTGGCAGGGC GACGGCTTCT ATTACAGTCG CTATCCCAAG CCCGACGGCA GTGCGCTTGC GGCCAAAAAC GAAAACCACC AGGTATTTTT CCACCGCATC GGCACGCCTC AGACGGACGA CAAGCTGGTA TTCGAAGACC CCGCAAACCC GCAGCGGTTC CATACAGTAG GCACGACCGA GGATGAGCAA TACGCCATTC TGAGCGTGAG CGATCGCGGC AAGGGCAAAG ATGGTAACGC GATTTGGGCG CTCAAAAACG GCGCAACCCG TTTTGTGCCG CTGCATGAAG AAATAACCGA TTCGCAATTC CGGGTGATCG ACAACATCGG CACCGACTTC CTTATCGAAA CAAACGACCA GGCACCTAAT GGCAAAGTAG TGCTCTTCAA AACGGCTGAC CGGACATGGC AGCCCATTCT CCCGGAGCGC GAAGAGCCAT TGGAAAACGC GGAGCTGGCC GGCGGTAAAC TTTTCGCGTC GTATCTGAAA GACGTCACTA CACGCACATA TGTGTACAAC CCGCAGGGCG TCCTGCAAAG TGAAATCGCA TTGCCCGGCC TTGGCGCCGC GGCCGGTTTC GGGGGTGAGA AGGACGATGC ATTCGTGTTT TACACCTTCA CTTCTTTCAA TTACCCTTCG ACTATTTTCC GCTACGATAT CGCCAGCGGG AAAAGCAGCG TATTCCGCGA GCCGGAAGTC GCATTCAAAC CGTCGGATTA CGAAACGAAG CAGGTTTTCT ATCCAAGCAA GGACGGCACC CGCATTCCGG CATTTATAAC TTATAAAAAA GGCTTGAAAC TGGATGGCAC CAACCCGACG ATCCTCTACG GCTACGGCGG CTTCAATGTG AGCCTGCCGC CTGCGTTTAG CCCTACCCGT ATCCCGTTTT TCGATCAGGG CGGGGTTTAT GTCCAGGCCA ACCTGCGTGG CGGCAGCGAG TACGGCGAGA AATGGCACGA GCAAGGAATG AAGCTCAAAA AGCAGAATGT GTTCGACGAT TTCATCGCAG CGGCAGAATT CTTGATCCGC GAGAAATACA CTTCACCTGA GCGCCTGGCC ATTCAGGGTG GTTCCAATGG CGGCTTGCTT GTTGGCGCGG TGATGAACCA GCGCCCCGAG CTTTTCAAAG TGGCTTTCCC GGCGGTAGGC GTAATGGACA TGCTCCGTTT TCACAAATTC ACCATTGGCT GGAACTGGAT CGCCGATTAC GGGAGCAGCG ACAATGCAGA GGAATTTAAA GTCCTGTACG GCTACTCGCC CCTGCACAAT ATCCGGGCAG GCGGCCATTA CCCGGCAACC ATGATCACCA CCGCCGATCA CGACGACCGC GTGGTGCCTG CGCATTCATT CAAATACGCG GCGGAGTTGC AAGCCAAAGC AGGCAATTCT TCGGCTAACC CGCTACTCAT CCGGATCGAT ACCAACTCCG GCCACGGCGC TAGTAATACT AAAAAAGCAC TTGAAACGCA GGCGGATATT TATGCGTTTT TGTTTCGGAA TATGGGGCTG ACGTGGAAGT GA
|
Protein sequence | MNSKIFLMSL ITASALSEYG NTQRLAYPET RKQAHFDEYH GVKVADPYRW LEDDRSEETA EWVKAQNEVT FGYLRAIPFR EKIIRDLEKA YNYPKYSAPR KKGEYFYFYK NDGLQNQAVL YRQKGLDGTP EVVVDPNKLS PDGTTRLTVF SLSKDGAYAV LGFSKGGSDW QEYQVMKMQD LSKLSEKVEW VKVSGAAWQG DGFYYSRYPK PDGSALAAKN ENHQVFFHRI GTPQTDDKLV FEDPANPQRF HTVGTTEDEQ YAILSVSDRG KGKDGNAIWA LKNGATRFVP LHEEITDSQF RVIDNIGTDF LIETNDQAPN GKVVLFKTAD RTWQPILPER EEPLENAELA GGKLFASYLK DVTTRTYVYN PQGVLQSEIA LPGLGAAAGF GGEKDDAFVF YTFTSFNYPS TIFRYDIASG KSSVFREPEV AFKPSDYETK QVFYPSKDGT RIPAFITYKK GLKLDGTNPT ILYGYGGFNV SLPPAFSPTR IPFFDQGGVY VQANLRGGSE YGEKWHEQGM KLKKQNVFDD FIAAAEFLIR EKYTSPERLA IQGGSNGGLL VGAVMNQRPE LFKVAFPAVG VMDMLRFHKF TIGWNWIADY GSSDNAEEFK VLYGYSPLHN IRAGGHYPAT MITTADHDDR VVPAHSFKYA AELQAKAGNS SANPLLIRID TNSGHGASNT KKALETQADI YAFLFRNMGL TWK
|
| |