| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4586 |
|---|
| Symbol | |
|---|
| ID | 8228192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5538016 |
|---|
| End bp | 5539458 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644932435 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003088952 |
|---|
| Protein GI | 255038331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000082424 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACC CTTTCTCTAA GATTCGAAAC TTCCTGATCC TAACCATTAG TTGTATCGCG
TCTTTCACAC ACGCTCAGGA TTCTACATTG TATTACAAAG CGTCGGTCTC AGCCGCCGGC
GCCACCGCTC AGACCCCTCT CTGGCAGCAT GCCAACCAAT TCGGGAGCAT TCCCCTCAAC
GGGAACTACG GAATTGCGAA TGCGGGACTG TATAAAGTTT ACAATCCCCA TAATCCGCGT
TTTTTCCAGT GGAGTGGCGG GATAGAAGGC GTTGCCAGCT ATGGCAAATC GGCCAATGCA
TTCATCTCCG ACGCCTACGT AGCCGCCCGA CTGGGCAAAT TGGAGATCCT GGCCGGGCAG
AAGAAGATGA TCACCGGTCT TGTGGATTCC AGCATGACAT CCGGCTCCAT CGCCATAGCC
GGCAATGCAA GGCCGCATCC CCGCATTCAG ATCAGCATTC AGGATTACCT GCCTCTCTAT
TTTACGGGAA ATATCCTCGC ATTCAAGTTT TCCTATTCCG ATGGTTACCT CGGGGCTAGC
AATATCAATT ACGGAAGCGC TCCCCGCGTC CCATCCACCT ACCTTCATCA AAAGATGCTT
TACCTGCGCA TTGGACGCCG CGCCGACCGC TACAAGGTTT ACCTCGGCGT GAACCACCAG
GCAATGTGGG GTAGCGAGGA TAAGCTCAAT CCGCTGTACG ACCTCAAACT GTCCGACGCC
TACCTCGACA TGCTGATCGG CAAAACTGTC GGCCACCGGA AAATCGGAAA CCACTTTGGG
ACGGTCGATC TCGGGGCGGA ATGGCGTGGA AAAGATTGGC TTTTCTTCGC TTACCGACAA
AATATTTATG AAACCGGCTC TCTGTTCAGC ATCACCAATT TTGAGGATGG TCTCAACGGG
ATCAGCGTCA AAAGGCTAAA ACCACTTCCC AAAGGGTCTA GTTATTTTGC ATTCCATTCA
TTTCTGCTGG AAGTGGTTGG AACCCGCAAC CAGATCAACA GCGCGCCGCT TTCAGGACTT
GCGATATTCG AGCGGGGCAA CTATTTCAAC AGCTACCTTT ATCAGCGCGG ATGGTCGTAT
TATGGCTCGG GAATCGGCAC GCCGCTGGCT CCGGCAGCCG GCACCACGCG TGATGATTTA
CCGCGGAATA ATTCAGAATT CACGAATAAT AATCGATTCT GGGCGTTTCA TACAGGAGCA
ACCGCAACCT GGATGCATTT GAAACTCTCG TTCCGGGGAA CCTACTCGCG TAACTCGGGA
TCTTTCCTGA GCCCATTCGA GCGCGTAAAG CATCAGGTAT CATTATTGCT GAGTGCAGAA
AAAAACGTAA ATATCTTGAA CGGCTGCAGT GTTTATTCCA CCTTATCCTC CGATATTGGG
AGGCTATATC AAAAAACCTA CGGCCTGGCC GTCGGAATTC GTAAAACTGG TTTCCTGGAT
TGA
|
|---|
| Protein sequence | MSHPFSKIRN FLILTISCIA SFTHAQDSTL YYKASVSAAG ATAQTPLWQH ANQFGSIPLN
GNYGIANAGL YKVYNPHNPR FFQWSGGIEG VASYGKSANA FISDAYVAAR LGKLEILAGQ
KKMITGLVDS SMTSGSIAIA GNARPHPRIQ ISIQDYLPLY FTGNILAFKF SYSDGYLGAS
NINYGSAPRV PSTYLHQKML YLRIGRRADR YKVYLGVNHQ AMWGSEDKLN PLYDLKLSDA
YLDMLIGKTV GHRKIGNHFG TVDLGAEWRG KDWLFFAYRQ NIYETGSLFS ITNFEDGLNG
ISVKRLKPLP KGSSYFAFHS FLLEVVGTRN QINSAPLSGL AIFERGNYFN SYLYQRGWSY
YGSGIGTPLA PAAGTTRDDL PRNNSEFTNN NRFWAFHTGA TATWMHLKLS FRGTYSRNSG
SFLSPFERVK HQVSLLLSAE KNVNILNGCS VYSTLSSDIG RLYQKTYGLA VGIRKTGFLD
|
|---|
| |