| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4582 |
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| Symbol | |
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| ID | 8228188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5531222 |
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| End bp | 5535208 |
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| Gene Length | 3987 bp |
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| Protein Length | 1328 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932431 |
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| Product | superfamily I DNA helicase |
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| Protein accession | YP_003088948 |
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| Protein GI | 255038327 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGA TTCTTAAAGC CTATCTAAAA CGACTTACCA ACCTCAGTAC CCGCAACAAG
TCGCTGTTAC TTACAGCCTT GTCCGCCGAA CAATTCCTGG ATTTTCACGA CACCGATTTC
CTGCTGTCGA AGCCGTCGGT CGACGTCCTG AAACAGGTAG TTTCGGGCAA AGGCCGGGTT
GCCTTGTGCG ACATGGCCGA TCCGCGGTTC GAGAAAGTGA ACGAAACCAG CCGGCGTTTG
CGCAAAATAG TGCGCACGGA GCGGTTTATC GAAGAAGAAA GGGGCTCGCG CGACTTATAT
GTAGGGTACC CGTTTATCAA AGGCAAGCTG TCGGACGGCA CGCCCATTCA CGCGCCATTA
CTGTTTTTCC CGGTAACGTT GCGCCTCGAC CGCGAGCAAT GGTGCCTCTT TGAGCGCGAC
GATAGCAGTG TGGCGCTAAA CCAGAGCTTT GCGCTGGCCT ACGGGCATTT CAACGAAACC
AAAATTCCGG ACGAAGTGCT GGAAAAGTCG TTCGAGGATT TCCCGGACGA CTTCCTCGAA
TTCCGGACGC AGCTCTATGA ATGGCTGAAA ACGACGCCTT TCAAAATCAA CTTCAATCAG
CAGCTTTTTG AGGATAAGCT CGTTGCATTC TCCGCTGAGA AAAGCGCAGA CATTGCAGCT
AATGAACGCA ATGGCGAGCT GAAACTCTAT CCCGAGGCTG TTCTCGGCAT ATTCCCACAA
GCTGGATCAT ACCTCGTTCC CGATTATAAC CGGCTGCTGG ATTTGGCTGA TGATCCGCAT
TTCAACATTC CGCTGGTCGG TTTCGAGGCC TATCATGCCA GTGAAAGCGG TCCGCAGGAG
CCGGCAGGTG ACGTGCGGCC GACCAGGGAG GAGGATATGC TCACGCCTTT CGCGATCGAC
GAGTCGCAGG AGGAAATTAT GCTGGCGGTG AAATCGGGAC GGTCGGTGGT TGTGCAGGGG
CCGCCGGGGA GTGGAAAATC ACAGCTGATT TGTAATCTGA TCGCCGATTT CGCTTCCAAA
GGCAAGCGTG TGCTGCTGGT GTGCCAAAAA CGGGCGGCGC TGGATGTCGT TTACCAACGT
CTGGCCACGA CCGGCATGAA GGATTTTACC GGACTCATCC ATGACTTCAA AAACGACCGG
TCGGCATTGT ATGCGCAAAT CGCCTCCCAA ATCGAAAAGG TTGAGGCGTA CCGGCAGCAG
AATTACAGCC TCGACTCGGT TTTTCTCGAA CGACAATTTA CCCAGGAAAG CCGGGCAATT
GATAAAACGG TGTCCGAACT CGACAGTTTT CGGGCTGCAT TGTTTGATGA AAACGAATGC
GGGGTGAGTA TCAAAGAGCT GTACCTCACC AGCGACGCGC AGGCTCCTCA CGCGGACCTG
CGACCGTACT ACCGTCATTT TCGGATAGAT GGTTGGGACG GTTTCAAGCG GCATTTGAAA
ACCTATTCCG ACTATGCTTT CCTGATCCGC CCCGGCCATC CGTGGCGGAC GCGCCGGAGC
TTTGCGGCAT TCGGGATTGC GGAGCTGCGG ACAATGGAGA ATATGCTTTC AGAATGGCCG
GCCGCAATGG AGAAGCAGCG CCTTGTATTT GAAGCATTGT CGGGGCAACC TTTTTCCAAA
GCATACCTGT CGAATCGCAA GCAGATTAGC GAGCGCCTGG CCGACATTAC CGATCTGCTT
ACAGAAGAAA CGTCGTGGAA GCTGGTTGAA AAATATGTTG ATTCTCCCAT TCAACCGCAC
GAACGGCTGG CATTGGTACG GCAGGCGGTG GATGCTTTGG AGGGATTCAT TAATGAAGAA
GGCATTGAAA TGTCCTTGCC GGTAGATCAG CTGGGTGCTT TTGGGATCAT GCTCAAAAAG
TCGCTCGAAA CAAAGCAATC TGCGGTTTCA GGGTTTTTCT GGGATGTTTT CAGCAAAGAG
AAGAAAGAAA TCGAGCGGGT GGCATCGGCC AATGGCCTCA CTGTTTCCCT CGACCACTTA
ATGCGGCTCG AAGCGCGTTT GCGCAATCGT ACCCAACTCG AATCTTGGCT GCGGAATGCC
AGTGTGGGTT TTGAATCAGC GCTTATCGAT GATTTTTCGG CCAACCGCGC TGAGGCATAC
CTCTCTTTTT TCCGTTCGGC AGAACGCGCG GCGGATGCGG TTGCACGTAT GGATGCGGGC
ATTTGGAAAG TGGTTTTTCA TGAAACCGTC CGAAAGAGCG GCCAGCTAAC AGATTTTGCA
AACACCATTC AAAATCTGGC GCAATGGTTG CAAGTGTGGG ACAGAATGGA AAAAGCGATG
CTGTCCTACC TGTTGCCGGA GCAGATTACT GCGCTGGTGG ACGATCCGGC GTACAGCGGC
ATCTTGCTCG ATTCGCTGCG GAATGACTTC GATTCACTGG CCGATATGGA CCGGCTTTGG
GAAGAAATGT CGGAAACACA GCGCGGCGCT ACGCAGGCTA CGCTTGCCAA GTGCGGAGAG
CTAGGCTTCT CCCAGTCGCA GCAAGCCGTT GATTTGTTTG AAAATAGCAT CAAACTGGCC
TGGATCGAGC ATATTGAAAC CAAATATCCC GCATTGCGCT CCGTTACGTC GCTCAAAATG
CAGCAATGGG AGAGCCAAAT TCAGGGTAGC ATTACCCTGA AACAAAAGCT GAGCGCCGAC
ATCTCGAATA TCAAACTGCG GGAAGCGACC TATGAAGACG TCGAAAAAAA CAGGCTCGGT
AACCGGGTAA CGTATCGTGA ACTGGGGCAC CAGGTGACGA AGAAACGCAA GATATGGCCG
ATCCGAAAGC TGCTTGAAAG CTATGCCGAC GAGGTTTTTG CGCTCATACC GTGCTGGATG
GCGTCGCCCG AAGCGGTTTC CGCCATTTTT CCGATGGAAA GCGGATTGTT TGACCTGGTG
ATTTTCGATG AGGCCTCGCA ATGCTATGCC GAATACAGTT TGCCCGCGGC GTTCAGGGGT
AAGCAATGGG TGGTTACCGG GGATAGCAGG CAGCTTTCGC CGAGCGATCT TTACCGCGTG
CGGTTCGAAG ATAGAACGGA AGACGAGGAA TACTTCGCCG CCATTGAAAT AGAATCACTG
CTTGACCTCG CAGGGCAGTC GCTCGACCAT TACCAGCTTA CAGGCCATTA TCGTAGCCTG
TCGCTGGATC TGATCGATTT TTCGAATAGA AACTTTTATA AGAAAAGTCT CAAACTGCTT
CCTGATTTTC ATAAAGTGAA CGACCGGGAA CCCGGTATCG AATACATCAA AACGGAGGGT
AATTGGAAAA ACAATACCAA TGCCGTGGAA GTGGAGGAGG TGCTGCGGCT CGTGCGCCAG
CTTGGCGAAA GTGGCAAAAG TATCGGCGTG GTGACTTTCA ATTTTTACCA GCAGGCCGCC
ATCCAGGATG CGCTGGAAAA GGAAACCACA TTACCGCAGG GCCTTTTTGT GAAAAATATT
GAAAACGTGC AGGGCGATGA GCGCGATGTG ATCATTTTCT CGATGGGCTA TGCGCCGGAT
GAGAAGGGCC GCATTTCAAT GCAATTCGGC AGTTTGAATA TGCAGGGAGG CGAAAACCGC
CTGAATGTGG CAGTAACGCG CGCGCGAGAG AAGATCTACT TCATTACGAG CCTGTGGCCT
TCACAGCTGC AAACCGAAAG CACAGCGAAC GAGGGACCGA AGCTGCTCCG GGCGTACATG
GATTATGCAT TGCAAGTGTC GGAAGGCAGG TTTGTGCCGG CGCCGCTTGC TACCGGGCAA
TTCCGCTCGG AATGGCTGCT GAAAGAGCGG TTGGTGAAAC AAAACGAAGC GTTCCGTAAG
GAGCTGCCTT TCGGCGACAT TACCGTAAAA GAAGAAGGGG CCTACAAGGG CTTGGTTCTG
ACGGACGACG ATCTTTACCA TTACAGCAAG TCGTCCAAAG AGCCTCACGC TTATTTGCCC
CTTCTGTTGC GGATGAAAAA CTGGCCGTTC AGGCGTGTTT ACAGTCGCGA ATATTGGTCG
GGAAACCTGA AAAACGGTTT GTTATAG
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| Protein sequence | MSRILKAYLK RLTNLSTRNK SLLLTALSAE QFLDFHDTDF LLSKPSVDVL KQVVSGKGRV
ALCDMADPRF EKVNETSRRL RKIVRTERFI EEERGSRDLY VGYPFIKGKL SDGTPIHAPL
LFFPVTLRLD REQWCLFERD DSSVALNQSF ALAYGHFNET KIPDEVLEKS FEDFPDDFLE
FRTQLYEWLK TTPFKINFNQ QLFEDKLVAF SAEKSADIAA NERNGELKLY PEAVLGIFPQ
AGSYLVPDYN RLLDLADDPH FNIPLVGFEA YHASESGPQE PAGDVRPTRE EDMLTPFAID
ESQEEIMLAV KSGRSVVVQG PPGSGKSQLI CNLIADFASK GKRVLLVCQK RAALDVVYQR
LATTGMKDFT GLIHDFKNDR SALYAQIASQ IEKVEAYRQQ NYSLDSVFLE RQFTQESRAI
DKTVSELDSF RAALFDENEC GVSIKELYLT SDAQAPHADL RPYYRHFRID GWDGFKRHLK
TYSDYAFLIR PGHPWRTRRS FAAFGIAELR TMENMLSEWP AAMEKQRLVF EALSGQPFSK
AYLSNRKQIS ERLADITDLL TEETSWKLVE KYVDSPIQPH ERLALVRQAV DALEGFINEE
GIEMSLPVDQ LGAFGIMLKK SLETKQSAVS GFFWDVFSKE KKEIERVASA NGLTVSLDHL
MRLEARLRNR TQLESWLRNA SVGFESALID DFSANRAEAY LSFFRSAERA ADAVARMDAG
IWKVVFHETV RKSGQLTDFA NTIQNLAQWL QVWDRMEKAM LSYLLPEQIT ALVDDPAYSG
ILLDSLRNDF DSLADMDRLW EEMSETQRGA TQATLAKCGE LGFSQSQQAV DLFENSIKLA
WIEHIETKYP ALRSVTSLKM QQWESQIQGS ITLKQKLSAD ISNIKLREAT YEDVEKNRLG
NRVTYRELGH QVTKKRKIWP IRKLLESYAD EVFALIPCWM ASPEAVSAIF PMESGLFDLV
IFDEASQCYA EYSLPAAFRG KQWVVTGDSR QLSPSDLYRV RFEDRTEDEE YFAAIEIESL
LDLAGQSLDH YQLTGHYRSL SLDLIDFSNR NFYKKSLKLL PDFHKVNDRE PGIEYIKTEG
NWKNNTNAVE VEEVLRLVRQ LGESGKSIGV VTFNFYQQAA IQDALEKETT LPQGLFVKNI
ENVQGDERDV IIFSMGYAPD EKGRISMQFG SLNMQGGENR LNVAVTRARE KIYFITSLWP
SQLQTESTAN EGPKLLRAYM DYALQVSEGR FVPAPLATGQ FRSEWLLKER LVKQNEAFRK
ELPFGDITVK EEGAYKGLVL TDDDLYHYSK SSKEPHAYLP LLLRMKNWPF RRVYSREYWS
GNLKNGLL
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