| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4562 |
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| Symbol | |
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| ID | 8228165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5505451 |
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| End bp | 5506248 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644932408 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003088928 |
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| Protein GI | 255038307 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTC AACTTTTTGA TAACCACGTC GCCATCGTCA CCGGTGCGGG CCAGGGCATC
GGATTTGAAA TCGCGAAGCA GCTTGCCTGC CAGGGCGCCG GGGTGATCCT GAACGATACC
AATAAGGCCC TCGCCGCCGA AGCAGCCAAG AAAATCCGCA ACAAGGAGGG GGAATGCGTC
GCTTTCGCGG GCGACGCCTC TCAGCCGGAG GTGATCGACG CGATGGTGGA TGAGGCCGTG
AAATGCTTCG GTAAATTGAC ATTGACCGTG TGCAATGCCG GCATCACGCT TTTCGGCGAT
TTCTTTGACT ATCCGGCGGA AAATCTGCGC AAAGTACTGG AAGTGAACCT GATGGGCTCA
TTCCTGCTTA CGCAGGCCGC GGCTAAGCAA ATGCGAAAGC AGAAGTCGGG CGGCAGGATA
TTGCTGATGT CGTCGGTAGT GGGGCACCAG GCACACCAGT TCCTGGGTGC GTATGCGATG
ACGAAAGCGG GTTTGGAAAT GCTCGCGAAA AACCTCGTGA TCGAGCTTTC TCCGCACGGT
ATTACCATTA ATGCAGTCGC GCCGGGCGCT ACGCTTACGG AGCGGACGCA GGCGGAAGAT
CCCACCTACC CCAAAACCTG GTCGGCGATC ACGCCCATGG GCCGGCCTGC GATTTGCGAA
GACATTGCCA ATGCCGCATT ATTCCTCCTA TCGCCGCATT CCGGCCACAT TACAGGGCAA
AGCCTGATCG TCGACGGCGG CTGGACGTCC GTGAGCCCCC TGCCCGATCT GAGCAATATG
AATGTCAAGA AAAGCTAG
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| Protein sequence | MSSQLFDNHV AIVTGAGQGI GFEIAKQLAC QGAGVILNDT NKALAAEAAK KIRNKEGECV
AFAGDASQPE VIDAMVDEAV KCFGKLTLTV CNAGITLFGD FFDYPAENLR KVLEVNLMGS
FLLTQAAAKQ MRKQKSGGRI LLMSSVVGHQ AHQFLGAYAM TKAGLEMLAK NLVIELSPHG
ITINAVAPGA TLTERTQAED PTYPKTWSAI TPMGRPAICE DIANAALFLL SPHSGHITGQ
SLIVDGGWTS VSPLPDLSNM NVKKS
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