| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4530 |
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| Symbol | |
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| ID | 8228133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5464337 |
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| End bp | 5465641 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932376 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase |
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| Protein accession | YP_003088896 |
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| Protein GI | 255038275 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.32673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.681503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACTT CCATAGAAAC GCTTTACGAT ATCTACCGCA AAGGCGCCAA AGTTTCCACC
GACACCCGCC AGATCACCGA CGGCTGCATT TTCTTCGCAT TGAAGGGTGA TAAATTCGAT
GGAAACCAAT ATGCGGCAGA GGCACTGCAA AAAGGCGCGG CCTACGCCGT GGTAGACGAC
CCAACTGTGG CCAACGGCGA CCGGTTTCTG CTTTTCGAAG ACGGCCTCAC GGCATTGCAG
GACCTGGCGC GGCACCACCG CAAAACCCTG GACATACCGG TGGTTGCATT AACCGGCTCC
AATGGCAAAA CCACCACCAA AGAGCTGATC GCGAAGGTGC TTTCGATGAA GTTCAACACG
TACGCCACGC GCGGCAACCT CAACAACCAC ATCGGCGTAC CGCTCACGGT CCTGAGCATC
GACCCGGCGA AGCATGAAAT GGCGGTCATC GAAATGGGTG CGAACCACCA GCAGGAAATC
GCATTGCTGA GCAGCATTGC ACAGCCCACG CACGGCCTTA TTACCAACAT CGGAAAGGCA
CATCTGGAAG GTTTCGGCGG TGTTTCGGGC ATCATTAAAG GCAAAGGCGA GCTGTTCGAT
TACCTTTCTA AAAAGAAGGG AACGGTGTTT GTGAACTCCA CCCAGGACGT GATCATGGAC
ATGGTGAGCA AACGCAGGGC ATTTGGTGAG ATCGTATTCT ACTGTTCGGA AAACAGTCCC
ATTAACCCGA CGCTGATCGA GGAAAACCCG AACGTGGTAT TCAGCAACGG CGGCAAAACT
GTAACCACCC ATTTACCAGG AAGATACAAT TTCGACAACA TTTGCGCCGC ATTGGCCGTA
GGAAAGCATT TCGGTGTGGA GGATGCGGAT GCCTACGAGG CGGTGGCGAC GTACGAGCCG
GACAATAACC GCTCGCAAAT CGTCAAGAAA GGGACGAATA CGGTGATAAT GGATGCATAT
AATGCCAATC CATCGTCAAT GGCCGCGGCG GTGGCCAATT TCGGGAGAAT GGAAGCGGCA
CGGAAGATAT TGATCCTGGG CGATATGTTT GAGCTCGGCG ATGCCGCGCC GGAGGAACAT
TTGGCTTTGG GGAAACAGAT TGCCGGTGAG AAGTTCGACG TCGTAATACT TGCCGGGAAA
CTCATGCAGC ACGCACTGCC AGCATTGCCG AAAGCGTACT ATTTTCCGGA TAAATTCTCC
TTGCATAACT GGATCATGGA CAATCCGCAG GAAAATACAC ATTTCCTCAT TAAGGGTTCC
CGCGGGATGT CGCTGGAAAC GGTACTCGGC GTGATGCCCG GTTGA
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| Protein sequence | MYTSIETLYD IYRKGAKVST DTRQITDGCI FFALKGDKFD GNQYAAEALQ KGAAYAVVDD
PTVANGDRFL LFEDGLTALQ DLARHHRKTL DIPVVALTGS NGKTTTKELI AKVLSMKFNT
YATRGNLNNH IGVPLTVLSI DPAKHEMAVI EMGANHQQEI ALLSSIAQPT HGLITNIGKA
HLEGFGGVSG IIKGKGELFD YLSKKKGTVF VNSTQDVIMD MVSKRRAFGE IVFYCSENSP
INPTLIEENP NVVFSNGGKT VTTHLPGRYN FDNICAALAV GKHFGVEDAD AYEAVATYEP
DNNRSQIVKK GTNTVIMDAY NANPSSMAAA VANFGRMEAA RKILILGDMF ELGDAAPEEH
LALGKQIAGE KFDVVILAGK LMQHALPALP KAYYFPDKFS LHNWIMDNPQ ENTHFLIKGS
RGMSLETVLG VMPG
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