| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4522 |
|---|
| Symbol | |
|---|
| ID | 8228125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5455752 |
|---|
| End bp | 5457068 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644932368 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_003088888 |
|---|
| Protein GI | 255038267 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0895169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGT CAACCGAAAC GTACATTCCG TACAAGGTAA AAGACATCTC GCTGGCCGAA
TGGGGCCGTA AAGAAATCAC ATTGGCAGAA GCTGAAATGC CTGGTTTGAT GGCGATCCGT
GCCGAATACG GTCCGTCACA GCCTTTGGCA GGTGCGCGTG TTGCGGGTTG CTTGCACATG
ACGATCCAGA CAGCCGTTCT GATCGAAACC CTTACAGCTT TGGGTGCGGA AGTTACCTGG
TCATCTTGTA ACATCTTCTC TACGCAAGAC CACGCCGCAG CGGCAATCGC AGCAGCGGGA
ATCCCGGTTT ACGCGTGGAA AGGCATGAAC GAAGAGGAAT TCAACTGGTG TATCGAGCAA
ACTTTGTTCT TCGGCGAAGA GCGTAAGCCT CTTAACATGA TCCTCGATGA TGGTGGTGAT
CTTACCAACA TGGTATTCGA CGAATATCCT GAGCTGATCG ACGGCATTAA AGGTCTTTCG
GAAGAAACTA CAACCGGTGT TCACCGCTTG TACGAGCGCT ACAAAAACGG TACGCTTCAC
CTGCCTTCGA TTAACGTAAA CGACTCAGTT ACAAAGTCTA AATTCGATAA CAAATACGGC
TGCCGCGAGT CATTGGTTGA CTCTATCCGC CGCGCAACCG ACCTGATGCT GGCTGGCAAA
GTAGCAGTAG TAGCAGGTTA CGGCGACGTA GGTAAAGGGT CTGCCGAATC ACTCCGTGGT
GCAGGCTGCC GCGTACTCGT TACCGAAATC GACCCGATCT GCGCATTGCA GGCTGCAATG
GACGGTTTTG AAGTAGTAAC AATGGACGAA GCTGCCGACC GCGCCAACAT CTTCGTTACT
GCAACGGGTA ACTACAAAAT CATCACCGAC CGTCATTTCC TCAAAATGCG TGACAAAGCG
GTAGTTTGTA ACATCGGCCA CTTCGACAAT GAAATCGACA TGGCTTGGTT GAACACGACT
TACGGCCACA CCAAATCGCA GATCAAACCT CAGGTGGATA TCTACAATGT GGAAGGTAAA
GACATCATCG TGCTGGCAGA AGGCCGTCTG GTAAACCTGG GCTGCGCAAT GGGCCACCCG
TCGTTCGTCA TGTCCTGCTC ATTCTCTAAC CAAACGCTGG CACAGATCGA GCTTTGGACC
AACACGGCTG CTTACGAGAA GAAAGTATAC GTTCTTCCAA AAGCACTGGA CGAGAAAGTT
GCTGCATTGC ACCTCGCACA CGTAGGCGCA AACCTCGACA AACTGTCCGA GGAGCAAGCT
GCTTACATCG GCGTTACTGT GGAAGGACCA TTCAAGGCGG AAACTTACCG TTATTGA
|
|---|
| Protein sequence | MATSTETYIP YKVKDISLAE WGRKEITLAE AEMPGLMAIR AEYGPSQPLA GARVAGCLHM
TIQTAVLIET LTALGAEVTW SSCNIFSTQD HAAAAIAAAG IPVYAWKGMN EEEFNWCIEQ
TLFFGEERKP LNMILDDGGD LTNMVFDEYP ELIDGIKGLS EETTTGVHRL YERYKNGTLH
LPSINVNDSV TKSKFDNKYG CRESLVDSIR RATDLMLAGK VAVVAGYGDV GKGSAESLRG
AGCRVLVTEI DPICALQAAM DGFEVVTMDE AADRANIFVT ATGNYKIITD RHFLKMRDKA
VVCNIGHFDN EIDMAWLNTT YGHTKSQIKP QVDIYNVEGK DIIVLAEGRL VNLGCAMGHP
SFVMSCSFSN QTLAQIELWT NTAAYEKKVY VLPKALDEKV AALHLAHVGA NLDKLSEEQA
AYIGVTVEGP FKAETYRY
|
|---|
| |