| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4497 |
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| Symbol | |
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| ID | 8228100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5428477 |
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| End bp | 5430072 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932343 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003088863 |
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| Protein GI | 255038242 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.515459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA ATACATTTAA ACATACCATT ATCGCCGGAA TCGCCGCCCT CACGCTCGGT
CTGGCCTCCT GCGACTCGGG CCTGCTCGAA ACCGTTCCGA ACGACCGTCT TTCCGAAGAC
TTATTCTGGA AAACCGAAAA CGACGCCAAA CTGGCCGTTA ACTCACTCTA CACGGACCTC
GACAGCACCA CCGCCGTCAC ATTCGACGGC ATTACCGACC TGGCGCATAC CAACCAGAGC
TTCAACGTGG CCGCTTACAT TGAAGCCGGC AGTTACGATG CGACGAGCTC GGTGATTTAT
GACGAATGGC GGCGCGCATA CCGCGGCATT CGCGGTGTGA ATTACTTCCT GGAAAATGTG
GATAAGGTGC CGAGCACCAA CACTGCGCTG CTCAACCAGC TGAAAGGCGA AGCAAAAGCA
TTGCGCGCTT ACCATTATCT GAAACTGGCT GGCTTGTTCG GTTCGGTCCC GTTGGTGACC
GCGTCGATCA GCATTGATGA AGGCCGTTCG CTCACCAGTA CGCCAGTGGA AGAGATCTGG
AATTTTGTCG AAAAAGAACT GACCGAAGCC GCTGCCTTGC TGCCGTCCAC TTACGGCGCT
GCCGACAAGG GCCGCTTCAC GAAAGGCGCT GCGCTGGGCC TGCTCGCCCG GGCGGATTTG
TACGCAGGCC GTTACCAAAA GGCAGCCGAT GCAGCCGACC AGGTGATCAA ATCGGGTGTG
TATGGCTTGT ATGAATCCTA CGAAAAGCTG TACAGTTACG CCGCGGAAAA TAACAAGGAA
GTGCTGCTGG ATAAACAGTA TCTGAAAGAC ATTGCCCAAA ACAACGTCTT CAACCTGCTG
GCGCCGTACA GTCAGAAGAA TGCGCAAAGC ACTTATGTTC CTACAAAAGC ATTGGTGGAT
AGCTACGAAA CTCTGGAAGG AAAGAAAATC TCCGATCCGG CGAGCGGCTA CGATCCAGCA
AAGCCTTATG CGAACCGCGA TCCGCGGTTG AAATTCTCGA TCTTCCTCGA AGGCGACGCA
TTACCAAGCG GCATTACATT CCAGCCCCGC CCGACGAGCG GCACCGCCGA CGCGATCGGC
AGCACGTACA TTGCTTCCAC GACCGGTTTT AATATCAAAA AGTACATCAA TAATGAAGAT
TTCGCGAACC CGACCAACAG CGGGATCAAT ATCATCCTGC TGCGTTACGC GGAAGTACTG
CTGACTTACG CGGAAGCGAA AATCGAGCTG GGCCAGACCG ATGCGACCGT GCTGGCTGCC
ATTAACCAGG TACGAAATGG CCGTACCGAC GTGAAGCAGC CTTCGGTAAC CGCTGCCACG
CAAGCCGCAT TGCGTGACAT CGTACGCCGC GAACGGACGG TAGAGCTGGC ATTTGAAGGC
CAAAGGATAT TTGATATCCG CCGCTGGAAA ACTGCTGAGC AGGTTTTACA AGGTCCGGTG
TTCGGCATCA CTTACCCGGA TGCGTCGGGC AAGCTGGTAA CGGTGCAGGC TGCTTCTTCC
AACCGCGTGT TCGATGCGAG CCGCCATTAC CTGTGGCCCA TTCCGCAGAA GGAGCGCGAT
TTGAACCCGA ATCTGAAACA AAATCCGAAC TGGTAA
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| Protein sequence | MKTNTFKHTI IAGIAALTLG LASCDSGLLE TVPNDRLSED LFWKTENDAK LAVNSLYTDL
DSTTAVTFDG ITDLAHTNQS FNVAAYIEAG SYDATSSVIY DEWRRAYRGI RGVNYFLENV
DKVPSTNTAL LNQLKGEAKA LRAYHYLKLA GLFGSVPLVT ASISIDEGRS LTSTPVEEIW
NFVEKELTEA AALLPSTYGA ADKGRFTKGA ALGLLARADL YAGRYQKAAD AADQVIKSGV
YGLYESYEKL YSYAAENNKE VLLDKQYLKD IAQNNVFNLL APYSQKNAQS TYVPTKALVD
SYETLEGKKI SDPASGYDPA KPYANRDPRL KFSIFLEGDA LPSGITFQPR PTSGTADAIG
STYIASTTGF NIKKYINNED FANPTNSGIN IILLRYAEVL LTYAEAKIEL GQTDATVLAA
INQVRNGRTD VKQPSVTAAT QAALRDIVRR ERTVELAFEG QRIFDIRRWK TAEQVLQGPV
FGITYPDASG KLVTVQAASS NRVFDASRHY LWPIPQKERD LNPNLKQNPN W
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