| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4465 |
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| Symbol | |
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| ID | 8228068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5388156 |
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| End bp | 5395412 |
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| Gene Length | 7257 bp |
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| Protein Length | 2418 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932311 |
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| Product | gliding motility-related protein |
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| Protein accession | YP_003088831 |
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| Protein GI | 255038210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.640342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCATCAA CGATTTACTC TTATCTTTTC AAGGTACTAA GCATTTCGGC CGGAGCGGTA
TTTCTCGTAA ACGTTTCGGG CGGCAAGGGG GAACCGTATT CGGAGCAGGC AGAAGAATGG
GCCATTATCG CCGATACGCT TAGGGAGGAT ACCACCAAAA AGAACATCGA CAGATCGGGC
TCGCAGCTCA TCATGCGATG GAAGGACTAC TATTCCAACC GGATTTCCGA ACCCAGGCCG
CGCTCACCAT TCTACCTGCG CGAGCCGAAC AATATCTCTA CCAACATTAT ACTCGACAGT
ACCGGAAAAA TTTCGGTAAC CGAGAAAATT CAGACGCCTG GCGCTCCGGC ACCAGGAGGA
GCGAATGATG CTGGCGTGGC GACACCAGGT GCACCGGCGC CCGGCGGCCC GGCGCCTGGC
ATCTCAATGC CCGGCGGCGC ATTGAACTAC CGCCTGCCTG AGCGGATGGA CCTTGCCACC
TACGACAAGA TCCAGGAAGA ACGCGCATTT AAAAGCCTCC TGCGGGAATA CGCGGGCAGG
CAGGACGGCA ACAGCGCCAT GGGCGCGCGC GGCCTGCTGC CCAAGCTCGA CCTTCCGCCC
GGCCTCACCA AACTGCTGGG CGACGATTTT ATCAATTTTA AACCCACAGG ATTTGTAGCG
CTGGACCTGG GGCTCATGCA CCAGTTCCTC GATAATCCGG CCATCCCGAT CCGTCAGCGC
CGCAACACGC AATTCATATT CAACGAGCAG ATCAATATCA ATTTCGACGC AAAACTGGGA
GATCAGCTCG GTTTTCAGAC GAACTTTGAC ACGAAGGCGA ACTTCAACTT CGAGAATGCG
ATCAAGCTGA ATTATAAGAA TCCCGAAGAA AGTTTTATCC GTAAAATCGA AGCGGGTAAT
ATCAACTGGG CCATTAACAG CCAGCTCATT CCGGGCGTGC AGAACTTGTT CGGTTTGAAA
ACCGACTTGC AGTTCGGCCG TTTGAGCGCC ACGTTCGTCG CTTCGCAACA GAAATCGAGC
AAGGAGCGGA TCACGCTGAG AGGCGGTGCG CAAAGCCGGG ACTTCGAATT GCGGGCCGAT
ACTTACGACG AAAACCGCAA CTTTTTCCTC TCGCAATATT TCAGGAACAT TTACGAAAGT
TCCCTGCAAA ACACGCCCAC CATCACCTCA GGTGTGACGG TAACGCGCCT CGAAGTGTAC
GTAACCAACC GGACCACCAC CACCGAGTCG CTTCGGAATG TAGTCGGTTT TGCCGATCTC
GGCGAGCCCG CACCCTACCG CGCCGGCAAC CCGAACGTGC AGCCCGTCCG CTCCACGTCA
CCAGCGAGCA ACGACGCCAA CGGTCTGTAT AAAACTTTAA CCGGCAACAA TGCATTCCGG
CAGGTAGATA ATGCCAACAC CGCCATTACA GGCCTGGGTT TGGAAAAAAC CACCGATTAT
GAGTTGCTCC GCGGAGCCAA ACGCCTTATC GTGGACCGTG ACTTTACATT CCATCCACAG
CTGGGGTACA TTTCACTTAC CAATGCGCTC CGGAACGACG AGGTGCTTGC GGTTTCCTAT
GAATATACGC TCAATGGGCG CGCATTCAAG GTGGGTGAAC TTACAGAGGA TTATCAGGCG
AGAAAAGACA ACGAGGTAAT TGCCCTGAAA CTCCTTAAAT CATCGACCAT CCGCAACAAT
ACCAAGCTGC CGATGTGGGA TTTGATGATG AAAAACATTT ATACGCTCGG TACCAGCCAG
ATCGACAAGC AAGGGTTCCA GTTGCGAGTA ATTTATAAGG ACGACCAGAC CGGTATCGAT
AACCCGAACT TGCAGGAAAG CAGCATTGCC AACATTCCGC TCGTGCGCCT GGCCGGCCTC
GATCGCCTGA ACCCCGTTAA CGACATCCAG CCCGACGGTA ACTTCGACTT CGTGGAAGGC
ATTACGATCG ACAGCAAAAC GGGCCGCATT ATCTTCCCCG TACTCGAACC GTTCGGCAGC
AACCTTTCCC GGAAATTTGG TCCCGGCGAG GACGTTTACC GTAACAAATA TGTGTTCAAT
GAGCTGTATC GCACGACGAT GATCGACGCG CAGCAGGTCT CGGAACGCAA CAAGTTTTTT
ATCAAAGGCT CCTACCAATC GAGCGGCGGT GCGGAGGTGC AGCTGCCGTT CGGGGTGCTC
GAAACTTCGG TAACCGTCAC GTCCGGCGGG GTGCCGCTTT CGCCGGGCTC GGATTATATC
GTGGAGGCGC AGATCGGCCG CGTGCGGATT CTGAACACGA GCGTGCTGAA CTCGGGACGT
GAAATCGTGA TCGAATATGA GCGGCCGGAT ATGTTCCAGA ACCAGATCAG AACGCTCGTC
GGAACGCGGC TCGATTATGT AGCCAACCGT AACCTGAGTG TCGGTTTGAC GGCCATCAAA
TACAAAGAGC GTACTGCGGG CTTCCTTTCC CGGGTGTCCA TCGGTAATGA GCCGGTCAAC
AACACCATGC TCGGATTTGA CGTGAATTTC CGCAAGGACG CACCATTCCT GACCAAATGG
CTGGATGCAT TGCCATTGAT CCAGACGAAA GAAATGTCGA CCATTCAGTT CAAAGGTGAA
TTTGCCAAAT TGCTCCCGGG CGTTTCGAAG GACGTGAACA ACCGCTCACT GGTGGATGAC
TTTGAAGCGG CGCGTACCAT TTACGACCTT TCGCGCCAGC CGCAGAAATG GCGCCTCGCA
GCGGTGCCAA CTAAATTCAG GGATGGTTAT GACGGTAAAA ACCTGAATTA CGGCTACAAA
CGTGCTAAAA TCTCCGCTTA TACGGTCGAT AACATCTTCG GCGGCGCGCA AGGACTGGGA
GGAGGCTATC AGCCACCGGC CAACTTCAAC GAGAAAGATC GCGAAAACTA TTACGAACGC
CTTTATCTGC CCACCGACAT TTTCCCGAAA CGGCCTATCG CAGGGTTGGT GACATATCCG
CAGCAAATCC TCGACATCGC GTACTTCCCG AATGAACGGG GGATGTACAA CTACAATACC
GATCTCGACC AGAATGGCCG GATGAAGAAT CCGAGAAACA ATTTCGGGGC ACTTAGCCGC
GCGATCACTT CGGATAACGA CTTTGATAAT GCCAACATCG AGAGCATTGA ATTCTGGGTG
TTGGATCCAT TTATCAACGA CGATAACGGT AAGGTACGCG ACGGTTTCTC TAATGTGCCC
AACACAACCG GAGGAAAGCT GGTGTTCAAC CTGGGTGATA TTTCCGAAGA TGTGATCCCT
GACGAACGTT ACAACTTCGA GAACGGCCTT CCGCTTGTGC CGAAGCAGGT GGGCGTCAAT
GTAGATTCAA CCGCGTGGGG TTATGCTACC AAAGCGCAAT ACCTCATCAA CGCATTCAGT
AATGAGGACG GAGCCAGAGA AAAGCAGGAC GTGGGTCTCG ATGGTTTGAC CAACGAAGAA
GAGCGCGCAT TCTTCAAAAG CTTTATCGAC CGTCTGCCCG CCAACCTTAC CGCCGAAGCA
CGCGCCAAGA TCCTGGCCGA CCCTTCCGGT GACGACTTCC AGTTCTTCCT CGGCGCGGAC
CTCGACAGCG CGGACCTGAA AGTACTGGAG CGCTACAAAA ACTACATCGG GATGGAGAAC
AACTCTCCCG AAAGCCAGGG AAGATCGGTG GACGTAACGC CGGCTTCGAC TAACATTCCC
GACGGCGAGG ATATGAACGT CGACAATACC ATTAACGACA ACGAATCTTA CTACGAATAC
GAAATTGACC TGAAGCCCGG CCAGCTGGAA GTAGGGAAGG GATATATTGT TGATAAAACG
GTTAACACGA AAGACAACCA GAATTGGTAC CTCTTCCGCG TCCCTATCAA GGAATTTACG
GGTGTGGTGG GTAATATGAA TGGATTTAAA TCAATCCGTT TCATGCGCAT GTACCTGACC
GACTTCCAGC AGCCGGTGGT GCTGCGTTTC GCGCAATTGC AAATGGTGGG TCAGCAATAC
CGGAAATATA CCTATAACCT CGACTCTCCC GGTTTGCAGG AAGTTCCTGA ACCTTACGAC
GCCAAGTTTA CTGTCGGAAC GGTGAGTATT GAAGAAAACA GCCAGGCCAA TAACAGTGCG
AACAAATACG TGTACGACAT GCCCCCGGGC TGGATACGCG ACCTGGACAA TACCCAGCGC
CCGCCATTGC AGCTGAACGA GCAGTCGATG AGCCTTTGTG TGACCGAACT TCGCGATGGT
GATTCGCGCG CGGTTTTCAA AAATGTGAAC CTCGACCTAT TGTTCCGCAA GCGCCTCCGC
ATGTATGTAC ACATGCAAAA CGAGCAGAGC GAGGACAACA TGGTGGGTAC ATTCATGCGC
ATTGGAACTG ACCTTACCCA AAACTATTAC GAGATCGACT TGTCGGCTTT GAAGGCTACC
CGCCCTAACC AGAGCGCAAG GGAGGAAATA TGGCCGGAAG GCAACGAGAT CAACATCGCG
CTGTCGGACC TGATCAATGC GAAGGCGCAG CGTAACCAGC AGATCGACAA AAACCTGAGC
GTGCCGTACA CCATTACCAC AGCCGACGGA CGATACAAAC TGACCGTGGT GGGTAACCCC
GACCTGAGTG CCGTAAAAGT GATGATGATC GGTGTACGCA ACCCGAAGTC GGTGGATGAG
CGTGCGAAGT CGTTTTGTAT CTGGGTAGAT GAAATGCACG TGGAAGGTTT TGACGATACG
GGCGGTATGG CGGCGATTGC GCAGCTGAAT GCCAAGCTGG CCGACTTCGC GACATTGACC
GCCTCGGGGC GCATCGAGAC ATTCGGCTTC GGAACGGTGC AGCAGCGCAT CGGCGAACGT
TCGCGTAACT TCACATCCGA ATATGGTTTC TCTTCCAACA TTGCATTGGA TAAGCTGCTT
CCGGCGAACT GGGGCTTCCA GATACCATTG TTTGTGAGCT ATGACAGGCG GAATGTGAAG
CCGCATTTCG ACCCGCTTGA CCCGGATACG CCGCTGAGCA CGTCGCTGGA CAACCTCCGA
TCGGACGAGG AGCGGAACGG TTACCGGCGC ATGGTGGAGG AAAATGCAGT GAAACGAGGA
TTTAACTTCT CCAACGTCCG GAAAGTCAAA ACGAAGCCCG GCGCCAAAAA TCATTTCTAC
GATTTTGAGA ACTTCGCATT CACCTACGCA TTCAGCGACG ACAAGCGCCG GAACATCCTG
ACGCAGGAAT ACAACCAGCG GGCTTACAAG GCAGGCATTG CCTACATGTA CGCCAGCCAG
CCGAAGGCGA TCGAGCCATT CAAGAAGTGG AAGGCGACAG GCCGCTGGGC GGAGTTTATC
AAGGAATTCA ATGTGACGCT GCTGCCGAAC ATGGTATCGC TGCGAACGGA TGTGGACCGC
CGCTTCCTGA AAACACAGCT CCGCAACGCC GACCTCACGA CCGACGGCAT GCAGCCATTG
TACGAAAAGT ATTTCTGGTT TAATCGCTAC TACGATTTCG GCTGGAACCT GACGCGCAAC
ATGACTTTGA CCTACGCGGC ATCGGCCAAC TCGATCATCG ACGAGCCGGA AGGCGATATT
GATACGGGAG AGAAAAAGGA TTCGCTCTGG ACTAACTTCA AAAAGCTGGG CCGTATCAAG
AATTTTGACC AAAAAATTGA CCTGACTTAC CGCCTGCCGC TTGACAAAAT TCCGGTGCTC
GACTGGATGT CGGCCGATTA TAAACATTCG ATCGGCTATC AGTACCAGGC CAATGCGTTG
AACCTGAAAG ATACTACAGG TCTGCCATTT GGCGATATTA TCCGCAACAG CCGCGAGCGG
GGCGTTACGG GCAAGGTGGA TTTTGTATTG CTTTATAACA AACTCCGCTA CCTGAAATTC
GCGAACACGC CATCCGTGGC AAGAAAGAAT TTTGCCCGTA GCCCGGGTGA TATCGAGGAC
ATTGATATGC GCACTACCGA CGTTGTCAAA GCGCTGACGA GGGCATTAAT GACGGTTCGC
GGGATTAATT TCAGCTATTC GGTTTTGGAA ACGACGGCAC TGCCGGGCTA TCTGAGAGCG
CCTAAATACT TCGGTCTGGA CAATGCGAAT GCGCCCGGAT TGGGCTTTGT GCTGGGCCAG
CAGGACAGGA ATTTCCAGGT GAAAGCGGCG GAAAAGGGCT GGATCACCAA GAGTCAGCAG
CAGAATATGC CGTTCCAGCA AACCATCGCG AAGAACTTCT CGGCCAATAC CACATTGGAG
CCATTCAAGG ATTTCAGGCT GATCATCGAG GCGCGGCTTA CGCGGCAGGA TGCTTACCAG
GAATTCTACC GGCCCGATTC TAGCGGAAAT TTCATATCCC AAAGCCCGCT GCGGAATGGC
CAGTTCAGCA TGTCGTTCAT GTCATTCCGG ACGGCATTTG CTAAAATGCG CCGCGATAAT
TCCTCGCCTG TGTTTGACAA ATTCCGCGCA TACCGCGCCA TCCTCCGCGA CCGCCTGAAT
GCGGAGAACA ACAGTGGCGG GGAGTATAAT GAAACATCGC AGGACGTACT CATTTCATCC
TTCTTTGCGG CCTACACCGG CAAGGATCCG AACACGGTAC GTACCAACCC GTTCCTGAAA
TTCCCGATGC CGAACTGGGA CCTGAGCTAT TCGGGACTTT CGCAGCTGCC GGCATTCAAG
CGCTTTTTCA GCTCGTTTAC ATTGCGGCAC AAGTATATGT CCAATTATAG TGTAGGTAAC
TTTACTTCGT CGCTGGATTA TGAGGCGTTG TATGTGAACC TGGCCGTAAC CGGCTATCCA
TTATCGTCGC GCTTGAATGA TTTGGGCCAG TACATTCCGG TGTTTGCGAT GAGCACCATT
ACACTTTCGG AGAAATTCCA GCCGCTCGTG GGCGTGGAGG TGCGCACGCA GAGCCGTGTG
ACCGCACGTT TAGAGTACAA TCGCGACCGT ACGATCGCAT TGAACCTATC GAACTCCCAA
CTAGCCGAGC TCTTCAATCA GGACATTACG GTGAATATTG GTTTTACCAA AAACAATGTC
CCGCTGCCGT TCAAGATCAA TGGCGTGAAG AAGAAACTGA AAAACGACAT GACGATGCAG
CTCGCGATGA CGTTCCGCGA TACCCGCTCG ATCCAGCGGA AGTTCGACGG CGAGAACATC
CCTATCGCCG GTAACATCAA CTTCCAGCTG CGCCCGACGG TGAATTATAT GGTCAACAAC
CGGTTGAGCG TCCAATTCTA TTTCGACCGC ACGTTCAACG ACCCGCTGGT TTCGAACTCG
TTCTACCGTG CCAATACGGC TGGCGGCGTG CAGCTGAAAT TCAATTTGGC GGAATAG
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| Protein sequence | MSSTIYSYLF KVLSISAGAV FLVNVSGGKG EPYSEQAEEW AIIADTLRED TTKKNIDRSG
SQLIMRWKDY YSNRISEPRP RSPFYLREPN NISTNIILDS TGKISVTEKI QTPGAPAPGG
ANDAGVATPG APAPGGPAPG ISMPGGALNY RLPERMDLAT YDKIQEERAF KSLLREYAGR
QDGNSAMGAR GLLPKLDLPP GLTKLLGDDF INFKPTGFVA LDLGLMHQFL DNPAIPIRQR
RNTQFIFNEQ ININFDAKLG DQLGFQTNFD TKANFNFENA IKLNYKNPEE SFIRKIEAGN
INWAINSQLI PGVQNLFGLK TDLQFGRLSA TFVASQQKSS KERITLRGGA QSRDFELRAD
TYDENRNFFL SQYFRNIYES SLQNTPTITS GVTVTRLEVY VTNRTTTTES LRNVVGFADL
GEPAPYRAGN PNVQPVRSTS PASNDANGLY KTLTGNNAFR QVDNANTAIT GLGLEKTTDY
ELLRGAKRLI VDRDFTFHPQ LGYISLTNAL RNDEVLAVSY EYTLNGRAFK VGELTEDYQA
RKDNEVIALK LLKSSTIRNN TKLPMWDLMM KNIYTLGTSQ IDKQGFQLRV IYKDDQTGID
NPNLQESSIA NIPLVRLAGL DRLNPVNDIQ PDGNFDFVEG ITIDSKTGRI IFPVLEPFGS
NLSRKFGPGE DVYRNKYVFN ELYRTTMIDA QQVSERNKFF IKGSYQSSGG AEVQLPFGVL
ETSVTVTSGG VPLSPGSDYI VEAQIGRVRI LNTSVLNSGR EIVIEYERPD MFQNQIRTLV
GTRLDYVANR NLSVGLTAIK YKERTAGFLS RVSIGNEPVN NTMLGFDVNF RKDAPFLTKW
LDALPLIQTK EMSTIQFKGE FAKLLPGVSK DVNNRSLVDD FEAARTIYDL SRQPQKWRLA
AVPTKFRDGY DGKNLNYGYK RAKISAYTVD NIFGGAQGLG GGYQPPANFN EKDRENYYER
LYLPTDIFPK RPIAGLVTYP QQILDIAYFP NERGMYNYNT DLDQNGRMKN PRNNFGALSR
AITSDNDFDN ANIESIEFWV LDPFINDDNG KVRDGFSNVP NTTGGKLVFN LGDISEDVIP
DERYNFENGL PLVPKQVGVN VDSTAWGYAT KAQYLINAFS NEDGAREKQD VGLDGLTNEE
ERAFFKSFID RLPANLTAEA RAKILADPSG DDFQFFLGAD LDSADLKVLE RYKNYIGMEN
NSPESQGRSV DVTPASTNIP DGEDMNVDNT INDNESYYEY EIDLKPGQLE VGKGYIVDKT
VNTKDNQNWY LFRVPIKEFT GVVGNMNGFK SIRFMRMYLT DFQQPVVLRF AQLQMVGQQY
RKYTYNLDSP GLQEVPEPYD AKFTVGTVSI EENSQANNSA NKYVYDMPPG WIRDLDNTQR
PPLQLNEQSM SLCVTELRDG DSRAVFKNVN LDLLFRKRLR MYVHMQNEQS EDNMVGTFMR
IGTDLTQNYY EIDLSALKAT RPNQSAREEI WPEGNEINIA LSDLINAKAQ RNQQIDKNLS
VPYTITTADG RYKLTVVGNP DLSAVKVMMI GVRNPKSVDE RAKSFCIWVD EMHVEGFDDT
GGMAAIAQLN AKLADFATLT ASGRIETFGF GTVQQRIGER SRNFTSEYGF SSNIALDKLL
PANWGFQIPL FVSYDRRNVK PHFDPLDPDT PLSTSLDNLR SDEERNGYRR MVEENAVKRG
FNFSNVRKVK TKPGAKNHFY DFENFAFTYA FSDDKRRNIL TQEYNQRAYK AGIAYMYASQ
PKAIEPFKKW KATGRWAEFI KEFNVTLLPN MVSLRTDVDR RFLKTQLRNA DLTTDGMQPL
YEKYFWFNRY YDFGWNLTRN MTLTYAASAN SIIDEPEGDI DTGEKKDSLW TNFKKLGRIK
NFDQKIDLTY RLPLDKIPVL DWMSADYKHS IGYQYQANAL NLKDTTGLPF GDIIRNSRER
GVTGKVDFVL LYNKLRYLKF ANTPSVARKN FARSPGDIED IDMRTTDVVK ALTRALMTVR
GINFSYSVLE TTALPGYLRA PKYFGLDNAN APGLGFVLGQ QDRNFQVKAA EKGWITKSQQ
QNMPFQQTIA KNFSANTTLE PFKDFRLIIE ARLTRQDAYQ EFYRPDSSGN FISQSPLRNG
QFSMSFMSFR TAFAKMRRDN SSPVFDKFRA YRAILRDRLN AENNSGGEYN ETSQDVLISS
FFAAYTGKDP NTVRTNPFLK FPMPNWDLSY SGLSQLPAFK RFFSSFTLRH KYMSNYSVGN
FTSSLDYEAL YVNLAVTGYP LSSRLNDLGQ YIPVFAMSTI TLSEKFQPLV GVEVRTQSRV
TARLEYNRDR TIALNLSNSQ LAELFNQDIT VNIGFTKNNV PLPFKINGVK KKLKNDMTMQ
LAMTFRDTRS IQRKFDGENI PIAGNINFQL RPTVNYMVNN RLSVQFYFDR TFNDPLVSNS
FYRANTAGGV QLKFNLAE
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